Pairwise Alignments

Query, 360 a.a., DUF1513 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., outer membrane component of uptake system, probably for ferrous iron (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (376), Expect = 1e-40
 Identities = 107/334 (32%), Positives = 153/334 (45%), Gaps = 11/334 (3%)

Query: 34  RSPQPALIGCAIEGRERFSVVMADNAGQAVGKLALPARGHGIAIHPTLPHAVAFARRPGQ 93
           +   P L+    +G  +   V     G  V    +  R H I  HPT P A+  ARRPG 
Sbjct: 28  KDKHPLLLSARDDGDGKHYAVGYRLDGTRVFATQVGQRCHDIINHPTQPIALFVARRPGT 87

Query: 94  FMSVFDYQTAQQIVLRPADTQRHYYGHGVYSHDGRYLYATEGGQKT-SRGVIGVYDVT-H 151
              + D +    +    +   RH+YGH V  + G +LYATE       RG++GVY     
Sbjct: 88  ESYLIDLRDGALLQTIASLPNRHFYGHAVIHNSGEWLYATENDTTDPGRGLLGVYRFEGE 147

Query: 152 HYQKVAEWSGFGIGPHEVILMADGR-LVVGVGGVHTFG--REPLNLESMQPSLTYLSAQG 208
                 E S  GIGPH+V  M DG  LVV  GG+ T    R  +NL++M+PSL  +   G
Sbjct: 148 RLVHSGEISTHGIGPHQVSWMPDGETLVVANGGIRTEAESRVEMNLDAMEPSLVLMQRDG 207

Query: 209 EVLEQITLPDRHLSIRHLAHDGDNTVLCGQQYRGQPDDYPPLVAMHTGTGPLKPLQAEPE 268
            +L + TL     S+RHL    D T++ GQQ+ G   +   L+A+     P +      E
Sbjct: 208 TLLSKETLAQSMNSVRHLGIASDGTIVSGQQFMGAAHESSELLAIKRPGQPFQAFPLPEE 267

Query: 269 QWARFNHYIASIAATDE--WILATSPPGNCYGIWSKATGELVELAALADASGVVVRHGAF 326
           Q     HY AS+A   +   +  T+P GN + IW   +GE+   A L D +GV      F
Sbjct: 268 QLQAMGHYTASVAVHSDLRLVALTAPRGNRFFIWDLDSGEVRLDAPLPDCAGVGAVADGF 327

Query: 327 QISSGSGKI----ILQSAPELSQSHMSNVMWDNH 356
            ++SG G+       Q+        +   +WDNH
Sbjct: 328 VVTSGQGRCRYYDCRQTQLVAKPLDLPAGLWDNH 361