Pairwise Alignments

Query, 360 a.a., DUF1513 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., outer membrane component of uptake system, probably for ferrous iron (from data) from Pseudomonas stutzeri RCH2

 Score =  160 bits (404), Expect = 6e-44
 Identities = 109/331 (32%), Positives = 159/331 (48%), Gaps = 11/331 (3%)

Query: 37  QPALIGCAIEGRERFSVVMADNAGQAVGKLALPARGHGIAIHPTLPHAVAFARRPGQFMS 96
           QP L+    +   +   V     G  V    +  R H +  HP LP AV   RRP +   
Sbjct: 30  QPVLLSARNDKDGKHYAVGYRLDGSQVFATPVAERCHDVYPHPYLPLAVFVGRRPSRESY 89

Query: 97  VFDYQTAQQIVLRPADTQRHYYGHGVYSHDGRYLYATEGGQKTS-RGVIGVYDVT-HHYQ 154
           + D +  + + +  +   RH+YGHGV+  DG + Y TE     + RGV+GVY +      
Sbjct: 90  LIDSRDGRLLQVLASPPHRHFYGHGVFHQDGEWFYTTENDTADAGRGVLGVYRLEDRQLV 149

Query: 155 KVAEWSGFGIGPHEVILMADGR-LVVGVGGVHTFG--REPLNLESMQPSLTYLSAQGEVL 211
           +V E +  GIGPH+++ M D   LV+  GG+ T    R  +NL++M+PSL  L   G ++
Sbjct: 150 RVGEHATHGIGPHQLLWMPDNETLVIANGGIRTEADSRAMMNLDAMEPSLVLLRRDGRLI 209

Query: 212 EQITLPDRHLSIRHLAHDGDNTVLCGQQYRGQPDDYPPLVAMHTGTGPLKPLQAEPEQWA 271
            +  LP+R  S+RHLA   D T++ GQQY G   D  PL+A+       +       Q  
Sbjct: 210 SKEQLPERMNSVRHLAIAADGTIVSGQQYEGDAMDRVPLLAIKRPGQAFQHFPLGERQRQ 269

Query: 272 RFNHYIASIAATDE--WILATSPPGNCYGIWSKATGELVELAALADASGVVVRHGAFQIS 329
             N Y AS+A  DE   +  T+P GN   IW   + EL + A L D +GV      F +S
Sbjct: 270 IMNQYTASLAIHDELRLLAVTAPRGNKVFIWDLDSTELRQEAHLPDCAGVAAVAEGFVVS 329

Query: 330 SGSGKIIL----QSAPELSQSHMSNVMWDNH 356
           SG G+  L          +   +   +WDNH
Sbjct: 330 SGQGRCRLFDCRGKGIASTPLELPAGLWDNH 360