Pairwise Alignments

Query, 435 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., iron-regulated protein A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 45  AQVVEHYADIAYA-VYADSRVTAQQLQKTIDRFLQAPTAQGLEEVKQAWLAARVPYQQSE 103
           A+VV++Y D+     Y+D +   Q L   ++ F  +P+    +    AWLAAR P++ SE
Sbjct: 236 AEVVKNYVDVVVLPTYSDLKAGNQALFDAVETFRTSPSNANFKACATAWLAARTPWETSE 295

Query: 104 VFRFGNAIVDDWEGQLNAWPLD-EGLIDYVAGSYQHELGNEG 144
            F FG       +  +++WPLD +G++  +      +L  +G
Sbjct: 296 AFLFGPVADKGLDPNMDSWPLDQDGIVQILTSGNYSDLNWDG 337



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 25/176 (14%)

Query: 233 YLKAAAQLLVTDLEWMEKQWA--SGEKDNYRQQLLSESAENGLRKMLFG-------MGSL 283
           Y++  AQLLV D   +   WA    E  +Y     ++ A   + +++ G       +G+ 
Sbjct: 47  YMRVVAQLLVNDATALYDDWAVKYNEGGSYADFFKNQDALTSVEQLIDGCVDIANEVGTA 106

Query: 284 SLGELAGERMKVALEANSTEDE-----HDCFSDNTHNSHYYNEQGIYNIYTGSYTRADGS 338
            +G+         L  ++ E++        +S ++   +  N   I N Y G+ T A  S
Sbjct: 107 KIGD------PYDLFIHNNEEKALYAVESWYSWHSREDYRNNIYSIRNAYYGTRTGAI-S 159

Query: 339 ELKGPSLYQLVAEKDANAAKEILQQFEAARTQVGELVTAAEKNNQHFDQLIAADNA 394
           EL   SL + VA  +AN   E+ +  + A   +   + +  +NN +  + ++A  A
Sbjct: 160 EL---SLSKAVAAVNANLDTEVKKAIDDAAAAIW-AIPSPFRNNINSPEAVSAMEA 211