Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator of various polyols utilization, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (293), Expect = 3e-31
 Identities = 86/273 (31%), Positives = 127/273 (46%), Gaps = 23/273 (8%)

Query: 30  FSCP---WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPH----MIA 82
           F CP   WH+H EYEL L         G  F GD IG     +L L GP LPH     +A
Sbjct: 30  FPCPLVRWHFHKEYELHLIVASS----GKVFIGDYIGNFYPQSLFLTGPNLPHNWISQVA 85

Query: 83  GRQLINKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAEL 142
             ++++K   L    + F  E  +    V  + + +  L + A YG+    +   R A  
Sbjct: 86  EDEVVHKRDML----VNFTDELFESGHQVFAELKTVAPLLERAQYGIEFRCKRTIRQAMT 141

Query: 143 LAN--VDQQPHSYQS-LRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQ 199
           L     D Q  S      ++  LL   DD Q   LS A    TA   + D   +   A  
Sbjct: 142 LMQRIADSQGMSRLGYFFILMELLAATDDYQL--LSGATSAQTADEHSIDRTNR---AVD 196

Query: 200 YVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALP 259
           Y+  HYA+ + + ++   L +  +   R+F++  G  F E + + RI K+CELLA    P
Sbjct: 197 YIFAHYARELSLEEVAEHLGMKPTYFSRVFKQATGRCFIEFVNRLRISKSCELLADGDKP 256

Query: 260 IALIAERTGFGNLSNFNRQFKTLKTMTPREFRQ 292
           +  +   +GF N+SNFNR+F+ LK MTP  +R+
Sbjct: 257 VTDVCFESGFNNISNFNRRFQQLKGMTPSHYRR 289