Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator of various polyols utilization, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  104 bits (260), Expect = 2e-27
 Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 15/264 (5%)

Query: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPH-----MIAGRQLIN 88
           W++H EYE+ L +       G   AGD IG      + L GPGLPH     +  G QL+ 
Sbjct: 57  WNHHPEYEIHLIRQGS----GKLLAGDYIGPFTAGHVALIGPGLPHDWMGDIAPGEQLVG 112

Query: 89  KAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQ 148
           +       ++ F    L  LQ  LP+   L+ L + A  G+  +  TA   A LL  + +
Sbjct: 113 R-----DVVLQFDGAALLDLQGSLPELSELKTLFELAQRGIEFTGGTAVEAALLLERIGE 167

Query: 149 QPHSYQSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQA 208
                Q L +   L+     A  + + V      + + N  + ++I  A  Y+       
Sbjct: 168 AT-GLQRLIMFLQLIGTLARAPKREIRVLASACYSPSLNERSSERINQAFDYLINELTSD 226

Query: 209 IKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTG 268
           I+++ +  ++ +SE+   R F++  G  F + +++ RI +AC LL  + L +A I    G
Sbjct: 227 IRLSVIAERVGMSEAGFSRFFKRITGHGFMDLMRKLRIQRACRLLVQTQLSVAEICFEVG 286

Query: 269 FGNLSNFNRQFKTLKTMTPREFRQ 292
           + N+SNFNR F+     TP ++R+
Sbjct: 287 YENVSNFNRHFRHEMHQTPSDYRR 310