Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Transcriptional regulator of various polyols utilization, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (258), Expect = 4e-27
 Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 5/259 (1%)

Query: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTL 93
           W++H E+E+ L +       G   AGD IG      + + GP LPH   G     +    
Sbjct: 41  WNHHPEFEIHLIRQGS----GKLLAGDYIGPFGPGHVAMIGPDLPHDWMGDLASGEHLPG 96

Query: 94  HSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSY 153
              ++ F    L  L+  LP+   LQ L + A  G+     TA + A LL  +       
Sbjct: 97  RDVVLQFDGATLLTLRRTLPELGDLQGLFERARRGLAFGGNTARQAAHLLEAIGPAQGLA 156

Query: 154 QSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQAIKITD 213
           +    +E L  +      + LS+A     A T ++ + ++I  A +Y++      ++++ 
Sbjct: 157 RLALFLELLHTLNQAPGDEALSLASPCY-APTLDARSSERIHKAFEYLQAELTGDLRLSV 215

Query: 214 LCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLS 273
           +  QL +SE    R F++  G  F + +++ R+ +AC LL  S +P+  I    G+ NLS
Sbjct: 216 IARQLDMSEPGFSRFFKRITGHGFIDLMRKLRVQRACRLLLQSEMPVTDICFEVGYNNLS 275

Query: 274 NFNRQFKTLKTMTPREFRQ 292
           NFNR F+     TP E+R+
Sbjct: 276 NFNRHFRIEMNQTPSEYRR 294