Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  116 bits (291), Expect = 6e-31
 Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 19/271 (7%)

Query: 30  FSCP---WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQL 86
           F CP   WH+H EYEL L         G  F GD IG     TL L GP LPH    +  
Sbjct: 30  FPCPLVRWHFHKEYELHLIVASS----GKVFIGDYIGNFYPETLFLTGPNLPHNWISQVA 85

Query: 87  INKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLS-EQTATRVAELLAN 145
            ++       ++ F  E  +    V  + ++L  L + A YG+    + T  +  +L+  
Sbjct: 86  EDEVVPKRDMLVNFTDELFESGHQVFTELKSLTPLLERAQYGIEFRCKHTIRQAMDLMQR 145

Query: 146 VDQQPHSYQS--LRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHK--KIQLAKQYV 201
           +       +     ++  LL   DD Q    +  P +       +D H   +   A  Y+
Sbjct: 146 IADAKGVTRLGYFFILLELLAATDDYQLLSGATTPQL-------ADEHNIDRTNRAVDYI 198

Query: 202 EQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIA 261
             HYA+ + + ++   L +  +   R+F++  G  F E + + RI K+CELLA    P+ 
Sbjct: 199 FAHYARELPLEEVAEHLGMKPTYFSRVFKQATGRCFIEFVNRLRISKSCELLADGDKPVT 258

Query: 262 LIAERTGFGNLSNFNRQFKTLKTMTPREFRQ 292
            +   +GF N+SNFNR+F+ LK MTP  +R+
Sbjct: 259 EVCFESGFNNISNFNRRFQQLKGMTPSHYRR 289