Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 63.5 bits (153), Expect = 6e-15
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 18/165 (10%)

Query: 148 QQPHSYQSLRVIESL-----LVMADDAQAQRLSVAPYVMT-------------ALTSNSD 189
           Q  H + S  V   +     LV AD  +A  LSVA  ++               LT+ S 
Sbjct: 164 QAAHLFSSAGVTAGIDLALALVEADLGRALALSVAQRLVMFLRRPGGQTQFSPMLTAPSG 223

Query: 190 THKKIQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKA 249
              ++    +++  H    + I  L  Q H++  +  RLF +  GM   +++++ R+  A
Sbjct: 224 GVARLAALLEWIPGHLGDDLSIEALAAQAHMTPRTLCRLFSQETGMGPGQYIERVRLEAA 283

Query: 250 CELLASSALPIALIAERTGFGNLSNFNRQFKTLKTMTPREFRQRF 294
             LL  +   IA +A  TGFG+  N  R F+   +++PR+F QRF
Sbjct: 284 RNLLLDAQASIATVARLTGFGHPENLRRSFQKHLSVSPRDFYQRF 328