Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 62.8 bits (151), Expect = 9e-15
 Identities = 65/249 (26%), Positives = 102/249 (40%), Gaps = 37/249 (14%)

Query: 56  YFAGDAIGAVEHNTLLLYGPGLPHM---IAGRQLINKAQTLHSTIIWFKQEWLDKLQSVL 112
           YF GDA   +   TL+L  P   H    I GR            + +    WL  LQ  L
Sbjct: 53  YFNGDAQERIARGTLVLINPQTVHACNPIDGRPW-------SYLMFYVDARWLGALQHEL 105

Query: 113 PQAQ--------ALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSYQSLRVIESLLV 164
             +          +Q L Q    G+       T++   L +        QS  V    L+
Sbjct: 106 GVSSDGHFIPYAPIQSLDQALFNGL-------TQLYATLRDPQADTLRKQSAAVEYFTLL 158

Query: 165 MADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQAIKITDLCHQLHLSESS 224
                  Q L+ AP        +++  +++  A  Y+ +H  +A+++ D+C    LS S 
Sbjct: 159 Q------QTLAPAP-----TQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSPSY 207

Query: 225 AYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLSNFNRQFKTLKT 284
             R F++HYGM+   +L   RI ++   L    L +A IA   GF + ++F R FK    
Sbjct: 208 LIRTFKQHYGMTPHAYLLNRRIQRSQHWL-RQGLDLAEIALAAGFADQAHFQRTFKRQLA 266

Query: 285 MTPREFRQR 293
            TP ++R R
Sbjct: 267 ATPGQYRDR 275