Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 4e-27
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 5/259 (1%)

Query: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTL 93
           W++H E+E+ L +    + V    AGD IG      + L GP LPH   G     +    
Sbjct: 57  WNHHPEFEIHLIRQGSGKLV----AGDYIGEFAAGHVALIGPDLPHDWIGDLAPGEHLPG 112

Query: 94  HSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSY 153
              ++ F    L  L+  LP+   LQRL + A  G+  +  TA + A LL  +       
Sbjct: 113 RDVVLQFDGAALLALRGTLPEMGDLQRLFEQARRGLEFTGATAVQAARLLEEIGPA-QGL 171

Query: 154 QSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQAIKITD 213
           + L +   L+     A AQ + +      A T ++ + ++I  A  Y+       I+++ 
Sbjct: 172 ERLILFLQLVNTLMKAPAQEVRLLASTWYAPTLDARSSERINKAFDYLLTELTSDIRLSV 231

Query: 214 LCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLS 273
           +  +L +S+    R F++  G  F + +++ R+ +AC LL  S + ++ I    G+ NLS
Sbjct: 232 IAQRLDMSDPGFSRFFKRTTGHCFIDLMRKLRVQRACRLLLHSEMSVSDICFEVGYANLS 291

Query: 274 NFNRQFKTLKTMTPREFRQ 292
           NFNR F+     TP E+R+
Sbjct: 292 NFNRHFRVEMQQTPSEYRR 310