Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (280), Expect = 1e-29
 Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 19/271 (7%)

Query: 30  FSCP---WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQL 86
           F CP   WH+H EYEL L         G  F GD IG     +L L GP LPH    +  
Sbjct: 36  FPCPLVRWHFHKEYELHLIVASS----GKVFVGDYIGNFNPASLFLTGPNLPHNWISQID 91

Query: 87  INKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANV 146
             +       ++ F  E L+    V  + + L  L + A YG+    +   R A      
Sbjct: 92  DGEVVPKRDMLVNFTDELLESGNQVFAELKTLTPLLERARYGIEFRCKRTIRQAMKQMQK 151

Query: 147 DQQPHSYQSLR---VIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHK--KIQLAKQYV 201
                    L    ++  LL  +DD Q           TA+   +D H   +   A  Y+
Sbjct: 152 IADSRGITRLGHFFILLELLAASDDYQLLS-------GTAVAHTADEHSVDRTNRAVDYI 204

Query: 202 EQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIA 261
             HY + + + ++   L +  +   R+F++  G  F E + + RI K+CELLA    P+ 
Sbjct: 205 FAHYGRELPLEEVAEYLGMKPTYFSRVFKQATGRCFVEFVNRLRISKSCELLADGDKPVT 264

Query: 262 LIAERTGFGNLSNFNRQFKTLKTMTPREFRQ 292
            +   +GF N+SNFNR+F+ LK MTP  +R+
Sbjct: 265 DVCFESGFNNISNFNRRFQQLKGMTPSHYRR 295