Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Paraburkholderia bryophila 376MFSha3.1

 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 173 RLSVAPYVMTALTSNSDTHKK----IQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYRL 228
           R+S  PY     ++ S T KK    I  + Q++ ++    I I ++     +SE +  R 
Sbjct: 116 RISFFPYSSPLSSAKSGTPKKEDEKIHASAQWLTENCEHDISIAEVAQAAAMSERTFLRR 175

Query: 229 FEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLSNFNRQFKTLKTMTPR 288
           F +  G + SE+L + R+ ++C LLA   LP+  IA R+G GN S   + F+    ++P 
Sbjct: 176 FRQQIGTTPSEYLLRARLERSCRLLAEGDLPVDKIARRSGMGNGSQLAKLFRKRFRVSPT 235

Query: 289 EFRQR 293
           EFR+R
Sbjct: 236 EFRRR 240