Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 69/273 (25%), Positives = 137/273 (50%), Gaps = 17/273 (6%)

Query: 29  EFSCPWHYHTEYELVLYQNPD--QRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQL 86
           EF+ P H H+E+EL   +     +R VG+  + + IG  +++ +L+ G  L H+    + 
Sbjct: 31  EFTYPIHNHSEFELNFTEKAAGVRRVVGD--SSEVIG--DYDLVLITGKDLEHVWEQNEC 86

Query: 87  INKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANV 146
             +++ +    I F  +   K      Q  +++R+   A  G+        ++  LL  +
Sbjct: 87  --RSKEIREITIQFSSDLFFKSFINKNQFDSIRRMLDKAQKGLCFPMSAILKIYPLLDTL 144

Query: 147 DQQPHSYQSLRVIESLLVMAD----DAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVE 202
             +   + +  VI+ + ++ +    + +A+ LS + +    + S+S   +++Q  ++Y+ 
Sbjct: 145 ASEKQGFYA--VIKFMTILYELSLFEEEARTLSSSSFAKIDVHSDS---RRVQKVQEYIN 199

Query: 203 QHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIAL 262
            HY + I++  L   + +++ S  R F+   G + S+++   R+G A  LL  S + IA 
Sbjct: 200 LHYQEEIRLGQLASMVGMTDVSFSRFFKLRTGKNLSDYIIDIRLGFASRLLVDSTMSIAE 259

Query: 263 IAERTGFGNLSNFNRQFKTLKTMTPREFRQRFQ 295
           I    GF NLSNFNR FK  K  +P+EFR+ ++
Sbjct: 260 ICYECGFNNLSNFNRIFKKKKDCSPKEFRENYR 292