Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., AraC family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  154 bits (390), Expect = 2e-42
 Identities = 94/302 (31%), Positives = 160/302 (52%), Gaps = 20/302 (6%)

Query: 1   MRPLIENVMSGISQDWVLREFRSKSQTQEFSCPWHYHTEYELVLYQNPDQRFVGNYFAGD 60
           M+P  E+V  G   D  +R +  +     F   WH+H EYEL L  N      G  + GD
Sbjct: 1   MKPAYEHVEFG--DDCSVRVYHRRLPRIPFE--WHHHPEYELTLTLNSQ----GKRYIGD 52

Query: 61  AIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQR 120
           +I     + L+L  P LPH  A  + I+ A    + +IWF  +W  +L  V P+   L+ 
Sbjct: 53  SIADYVEDDLVLVPPNLPHTWASNRSIDAASPQVAIVIWFGGDWARRLADVCPEYAPLRN 112

Query: 121 LQQHASYGVRLSEQTAT----RVAELLANVDQQPHSYQSLRVIESLLVMADDAQAQRLSV 176
           L + A+ G+  S   A     ++ +LL+N  ++      L V+ ++L    +A  + L+ 
Sbjct: 113 LLRRAACGLAFSPDVAAAMHGQLDDLLSNAPRE-----RLAVVLNVLCALAEAPGEPLA- 166

Query: 177 APYVMTALTSNSDTHK--KIQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYG 234
           +P   +  T     H+  +I      ++  +A+ +++++LC   ++SE S  R FE+H G
Sbjct: 167 SPAAFSDRTEGPSGHEPERINRVLSMIDLRFAEPLRLSELCEAANVSERSLARYFEQHIG 226

Query: 235 MSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLSNFNRQFKTLKTMTPREFRQRF 294
            S   ++ + RIG AC +LA ++ P++++A R+GF N++NFNRQFK LK +TP  +R++F
Sbjct: 227 ESVGRYIARVRIGHACRMLAHTSTPVSVVAARSGFPNVANFNRQFKALKELTPAAYRKQF 286

Query: 295 QA 296
            A
Sbjct: 287 AA 288