Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., DNA gyrase subunit A (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

 Score = 1050 bits (2715), Expect = 0.0
 Identities = 542/923 (58%), Positives = 686/923 (74%), Gaps = 61/923 (6%)

Query: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
           M++ AKEI  VN+EDE+R SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAMN LG   N
Sbjct: 1   MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELGAHSN 60

Query: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KAY KSAR+VGDVIGKYHPHGD +VYDT+VRMAQPFSLRY++VDGQGNFGS+DGDSAAAM
Sbjct: 61  KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYLMVDGQGNFGSVDGDSAAAM 120

Query: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
           RYTE RMS++AHEL+AD++KETVD+ PNYD  E  P V+PT+ P+LL+NG++GIAVGMAT
Sbjct: 121 RYTESRMSRLAHELMADIEKETVDFQPNYDEKELEPTVMPTRFPSLLVNGSAGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
           NIPPHNL E I+ C+A ID   + I+ LM+YIPGPDFPTA +I+G  GI   Y+TGRG+V
Sbjct: 181 NIPPHNLTEAINACIALIDTPELDIEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV 240

Query: 241 YMRSKAEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM 300
            +R+KA++E   NG+E I+V+EIPYQVNKARLIEKIAELVKEKK+EGIS LRDESDKDGM
Sbjct: 241 RIRAKADVEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM 300

Query: 301 RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV 360
           RI IE KR    EVVLNNLY  TQ+++ FGINMVAL +G+P+L NLK+ML+ F+ HRREV
Sbjct: 301 RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFIRHRREV 360

Query: 361 VTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVA 420
           VTRRTIFELRKAR RAH+LEGL +ALANIDE+IELI+ +A P EA+E ++A+ W+ G V 
Sbjct: 361 VTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWEPGLVG 420

Query: 421 AMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQL 480
           A+L  AG +A++PE L P  G+ +G Y L+E QA  IL++RLH+LTGLE EK+ DEYKQL
Sbjct: 421 ALLGAAGAEASKPEDLAPGVGLSNGFYQLSEVQASQILEMRLHRLTGLEQEKLTDEYKQL 480

Query: 481 LEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVV 540
           LE I  L+ IL + + L++VIR+EL  IR  + DARRTEI  +  D+D+ +LIA EDVVV
Sbjct: 481 LEVIQGLIRILENPDVLLQVIRDELINIREEYGDARRTEIRHSEEDLDILDLIAPEDVVV 540

Query: 541 TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYR 600
           TLSH GY K Q +S Y AQRRGG+G+SA   KEED+I++L + NTHD +L F++ GK + 
Sbjct: 541 TLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFW 600

Query: 601 MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLD 660
           + V+QLP A   ARG+PI+N +PLE  ER+ A+LPV E+++++++F AT +GTVKKT L 
Sbjct: 601 LPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFFATRNGTVKKTPLS 660

Query: 661 QFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQP 720
           +FA   A G IA+NL + D+L+GV +TDG+ +++LF+  GK VRF ES            
Sbjct: 661 EFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGEST----------- 709

Query: 721 VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDV------------ 768
                         VR MGRTA GVRG++LA G++VVSLIV +  G V            
Sbjct: 710 --------------VRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEV 755

Query: 769 -----------------------LTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNG 805
                                  LT TENGYGKRT L+EYP KGRGTQGV+ I+ +ERNG
Sbjct: 756 VETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNG 815

Query: 806 SVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRID- 864
            +V AV +   DE ++I++ GTLVRTR +E+S+VGRNTQGVTLIR S+GE +  ++R+D 
Sbjct: 816 KLVRAVLLGSTDEVLLISDGGTLVRTRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLDA 875

Query: 865 EIEESELPEGEEALVENDAPVAQ 887
            +EE E    E   + +DAP A+
Sbjct: 876 SLEEPEDVVDEAVAITSDAPPAE 898