Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., DNA gyrase subunit A from Pseudomonas syringae pv. syringae B728a

 Score = 1132 bits (2927), Expect = 0.0
 Identities = 588/936 (62%), Positives = 721/936 (77%), Gaps = 70/936 (7%)

Query: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
           M +LAKEI PVNIEDEL+ SYLDYAMSVIVGRALPD RDGLKPVHRRVLFAM+ LGNDWN
Sbjct: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60

Query: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           K YKKSARVVGDVIGKYHPHGD+AVYDTIVRMAQPFSLRY+LVDGQGNFGS+DGD+AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
           RYTEVRM+K+AHELLADL KETVD+VPNYDGTE IPAV+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
           NIPPHNLGEVIDGCLA IDN  +T+DELM YIPGPDFPTAA+I+GR GII+AY+TGRG++
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240

Query: 241 YMRSKAEIET-DK-NGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKD 298
           YMR+++ +E  DK  G++ I+++E+PYQ+NKARLIEKIAELVKEKK+EGI+ LRDESDKD
Sbjct: 241 YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300

Query: 299 GMRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRR 358
           GMR+VIE +R  V EV+LNNLYA TQLQ+ FGIN+VAL +G+P++ NLK++L+ FV HRR
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR 360

Query: 359 EVVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGN 418
           EVVTRRT+FELRKARER HILEG A+AL+NID +I LI+ + TPAEAKE LI   W+   
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA 420

Query: 419 VAAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYK 478
           V  M+ERAG D+ RPE L+PQYG+R+GKYFL+ +QAQAIL+LRLH+LTGLEHEK+L EY+
Sbjct: 421 VVEMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLGEYQ 480

Query: 479 QLLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDV 538
           ++L +I  L+ IL S  RLMEVIREELE IR+ + DARRTEI  A  D+ + +LI  E+ 
Sbjct: 481 EILNQIGELIRILNSATRLMEVIREELELIRSEYGDARRTEILDARLDLTLGDLITEEER 540

Query: 539 VVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKT 598
           VVT+SH GY K Q L+ Y+AQRRGGKGKSAT +K+EDYI  LLVAN+H  +L+FS++GK 
Sbjct: 541 VVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFSSKGKV 600

Query: 599 YRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPV---------------------- 636
           Y +K Y++P ASR ARG+P+VNLLPL + E IT +LPV                      
Sbjct: 601 YWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALEGELDD 660

Query: 637 ----TEFSEDK-------------FIFMATGDGTVKKTSLDQFANVRANGLIALNLRDED 679
               +E  E++             FIFM+T +GTVKKT L  F+  R++GLIAL L + D
Sbjct: 661 AENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALELDEGD 720

Query: 680 SLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENGQPEIKFKGVRPMG 739
            LI   ITDGE EIMLFS  GKV RFKES+                         VR MG
Sbjct: 721 ILISAAITDGEQEIMLFSDGGKVTRFKESD-------------------------VRAMG 755

Query: 740 RTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIK 799
           RTA GVRGM+L +G +++S+++P+    +LT +E GYGKRT++SE+P   RG QGV+++ 
Sbjct: 756 RTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMV 815

Query: 800 VSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVG 859
            +ERNG +VGAVQV +G+E M+I++ GTLVRTRV EVS +GRNTQGVTLI+ +  E +VG
Sbjct: 816 SNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVG 875

Query: 860 LQRIDEIEESELPEGEEALVEN---DAPVAQDDDGE 892
           L+R+ E  E E  E E  LV+    DA    DD GE
Sbjct: 876 LERVQEPSEVEGEELEGELVDGVIVDA-AEVDDAGE 910