Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., DNA topoisomerase IV subunit A from Sinorhizobium meliloti 1021

 Score =  414 bits (1065), Expect = e-120
 Identities = 260/697 (37%), Positives = 392/697 (56%), Gaps = 74/697 (10%)

Query: 8   ITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSA 67
           I PV+++  L   YL YA+S I+ RALPDVRDGLKPVHRR++ AM+ +G   N ++KK A
Sbjct: 15  IQPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGLRPNSSFKKCA 74

Query: 68  RVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRM 127
           R+VGDVIGK+HPHGD +VYD +VR+AQ FS RY +VDGQGNFG+IDGD+AAA RYTE +M
Sbjct: 75  RIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPVVDGQGNFGNIDGDNAAAYRYTEAKM 134

Query: 128 SKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNL 187
           +++A  LL  +D++ VD+ P Y+  +Q P VLP   PNLL NGASGIAVGMAT+IPPHN 
Sbjct: 135 TEVAALLLEGIDQDAVDFRPTYNEEDQEPTVLPGAFPNLLANGASGIAVGMATSIPPHNA 194

Query: 188 GEVIDGCLAYIDNEAITIDELM--------DYIPGPDFPT-AALISGRKGIIDAYKTGRG 238
            E+ D  L  I +   T+++L+          I GPDFPT   ++  R  + ++Y+TGRG
Sbjct: 195 HELCDAALHLIKHPDATVEDLLFDPANPQRGGIEGPDFPTGGVIVESRASMAESYRTGRG 254

Query: 239 KVYMRSKAEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKD 298
              +R++  +E    G   I+V+EIPYQV K+RLIEKIAEL+  +K+  +  +RDES +D
Sbjct: 255 GFRVRARWAVEDLGRGGFQIVVTEIPYQVQKSRLIEKIAELLIARKLPLLEDIRDESAED 314

Query: 299 GMRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQ-PKLFNLKEMLKCFVDHR 357
              +++   R     +++ +L+  T+L++   +NM  L  G+ P++  L E+L  ++ HR
Sbjct: 315 VRVVLVPKSRSVDANILMESLFKLTELESRIPLNMNVLSMGRVPRVMALNEVLSEWLAHR 374

Query: 358 REVVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLG 417
           REV+ RR+   L     R  IL G  +A  NIDE+I +IR    P               
Sbjct: 375 REVLQRRSRHRLAAIDRRLEILGGYLIAYLNIDEVIRIIREEDEPK-------------- 420

Query: 418 NVAAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEY 477
             A M+ER G                     LT+ QA+AIL++RL  L  LE  +I  E+
Sbjct: 421 --AVMIERFG---------------------LTDVQAEAILNMRLRSLRKLEEFEIRTEF 457

Query: 478 KQLLEEIAALMHILASTERLMEVIREELEAIRAGFSDA----RRTEITAATHDIDME--- 530
             L +E A +  +LAS ++  + +  E+  ++  F+ A    +R    +   D D+E   
Sbjct: 458 DSLSKEKAEIEALLASGDKQWQAVAWEIGEVKKKFAKATELGKRRSTFSDAPDADVEAIQ 517

Query: 531 -ELIAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNI 589
             +I +E + V +S +G+++        A +      S+ + K+ D ++    A T D I
Sbjct: 518 QAMIEKEPITVVISEKGWIR--------ALKGHIADTSSLQFKDGDGLKVSFPAQTTDKI 569

Query: 590 LLFSTRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSED---KFIF 646
           L+F+T GK Y +   +LP       G+P+  ++ +E ++ +     +T F  D   K I 
Sbjct: 570 LIFTTGGKAYTLGGDKLP--GGRGHGEPLRIMVDMENDQDV-----LTAFVHDPARKLIV 622

Query: 647 MATGDGTVKKTSLDQFANVR-ANGLIALNLRDEDSLI 682
            +T       T  D  AN R    ++ + + DE  L+
Sbjct: 623 SSTAGNGFVVTESDIVANTRKGKQVMNVTMPDEAKLV 659