Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 863 a.a., DNA gyrase subunit A from Pedobacter sp. GW460-11-11-14-LB5

 Score =  813 bits (2100), Expect = 0.0
 Identities = 436/903 (48%), Positives = 606/903 (67%), Gaps = 78/903 (8%)

Query: 7   EITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKS 66
           +I  +NIE++++S+Y+DY+MSVIV RALPDVRDGLKPVHRRVL+ M  LG   NK +KKS
Sbjct: 12  KIIQINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDLGVTSNKPHKKS 71

Query: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVR 126
           AR+VG+V+GKYHPHGD++VY T+VRMAQ +SLRY +VDGQGNFG IDGDS AAMRYTE R
Sbjct: 72  ARIVGEVLGKYHPHGDASVYFTMVRMAQDWSLRYPMVDGQGNFGHIDGDSPAAMRYTEAR 131

Query: 127 MSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHN 186
            SKIA E+LAD++K+TVD+  N+D T Q P VLP KIPNLL+NG+SGIAVGMATN+ PHN
Sbjct: 132 FSKIAEEMLADINKDTVDFQLNFDDTLQEPTVLPAKIPNLLVNGSSGIAVGMATNMAPHN 191

Query: 187 LGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKA 246
           L EVIDG + YIDN  ITI+ELM ++  PDFPT  +I G  G+ +A++TGRG++ MR+KA
Sbjct: 192 LTEVIDGVVNYIDNRDITIEELMKFVKAPDFPTGGIIYGYTGVKEAFETGRGRIVMRAKA 251

Query: 247 EIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIEC 306
           EIE+ K+ +E IIV+EIPYQVNKA++IE+ AELV EKK+EGIS ++DES+KDG+RIV E 
Sbjct: 252 EIESIKD-REVIIVTEIPYQVNKAQMIERTAELVGEKKLEGISNIKDESNKDGIRIVYEI 310

Query: 307 KRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTI 366
           KRDA   +VLNNLY  T LQT+F +N +AL  G+P++ NLK+++  FVDHR +V+ RRT 
Sbjct: 311 KRDANASIVLNNLYKYTALQTSFSVNNIALVKGRPQMLNLKDLIVHFVDHRHDVIVRRTR 370

Query: 367 FELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERA 426
           +EL +A +RAHILEG  +AL ++DE+I+LIR + TP +A+ GL+                
Sbjct: 371 YELAEAEKRAHILEGYLIALDHLDEVIKLIRASETPEDARLGLME--------------- 415

Query: 427 GTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAA 486
                              K+ L++ QA+AILD+ L +LTGLE +KI +EY +L++ I  
Sbjct: 416 -------------------KFGLSDIQARAILDMTLRRLTGLERDKIKEEYAELMKTIEH 456

Query: 487 LMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEG 546
           L  ILA     M++I++EL  IR  F D RRT I  +  D+ ME+ I  E+VV+T+SHEG
Sbjct: 457 LKSILADEGLRMQIIKDELAEIRQKFGDERRTTIVHSAEDMSMEDFIDDEEVVITISHEG 516

Query: 547 YVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQL 606
           YVK    ++++AQ RGGKG   +  + ED+IE +LVA  H+ +L F+  G+ + ++VY++
Sbjct: 517 YVKRTPATEFKAQGRGGKGSKGSTSRNEDFIEHMLVATAHNYMLFFTEAGRCFWLRVYEI 576

Query: 607 PLASRTARGKPIVNLLPLEENERITAILPV-----TEFSEDKFIFMATGDGTVKKTSLDQ 661
           P  SRT++G+ I N++ + + E+I A + V      E+ E+ FI M T  GT+KKTSL+ 
Sbjct: 577 PEGSRTSKGRAIQNIINIPKEEKIKAYIKVKNLKDQEYLENNFIIMCTKKGTIKKTSLEA 636

Query: 662 FANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPV 721
           ++  R NG+ A+N+ D D L+   +T+GESEI++  + G+ +RF ES             
Sbjct: 637 YSRPRVNGINAININDGDVLLEACLTNGESEIVMALRSGRAIRFNEST------------ 684

Query: 722 LDENGQPEIKFKGVRPMGRTAAGVRGMKLA-DGDQVVSLI-VPKTEGDVLTVTENGYGKR 779
                        VRPMGRTA GVRG++LA D D+VV +I V   E  VL V+E GYGKR
Sbjct: 685 -------------VRPMGRTATGVRGVRLAHDQDEVVGMIAVNNPEVTVLVVSEKGYGKR 731

Query: 780 TSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQV 839
           T + +Y    RG +GV +I V+E+ G +V    V + ++ M+I  +G ++R  V+ +  +
Sbjct: 732 TDIEDYRVTNRGGKGVKTINVTEKTGQLVSIKDVTDSEDLMIINRSGIVIRIPVSALRVM 791

Query: 840 GRNTQGVTLIRTSEGESVVGLQRIDEIEESE---------LPEGEEALVENDAPVAQDDD 890
           GR TQGV LI     + +  + +ID  E+ E         + +GEE  VE D     DD 
Sbjct: 792 GRATQGVRLISLKGDDEIASVTKIDHEEDEEETVDLTDVVVTDGEE--VEADTTPETDDT 849

Query: 891 GEQ 893
            E+
Sbjct: 850 EEE 852