Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 873 a.a., DNA gyrase subunit A-like protein from Marinobacter adhaerens HP15

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 574/894 (64%), Positives = 717/894 (80%), Gaps = 28/894 (3%)

Query: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
           M +LAKEI PVNIEDEL+ SYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAM+ L NDWN
Sbjct: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN 60

Query: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY LVDGQGNFGSIDGD+AAAM
Sbjct: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYPLVDGQGNFGSIDGDNAAAM 120

Query: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
           RYTE+RM KIAH LLADLDKETVD+V NYDGTE+IP VLPT++PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRMEKIAHSLLADLDKETVDFVDNYDGTERIPEVLPTRVPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
           NIPPHNL EV++GCLA IDN  +TIDELM++IPGPDFPT  +I+GR GI++AY+TGRG++
Sbjct: 181 NIPPHNLTEVVNGCLALIDNPDLTIDELMEFIPGPDFPTEGIINGRAGIVEAYRTGRGRI 240

Query: 241 YMRSKAEIETD-KNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
           Y+R++ EIE D K  ++ II++E+PYQ+NKARLIEKIAELVKEK++EGIS LRDES+K+G
Sbjct: 241 YIRARHEIEHDNKTNRDAIIITELPYQLNKARLIEKIAELVKEKRLEGISELRDESNKEG 300

Query: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
           +R+VIE +R    +VV+NNL+A TQL+T FGINMV L NG+PK  NLK++L  FV HRRE
Sbjct: 301 IRVVIELRRGENPDVVVNNLFAQTQLETVFGINMVGLINGEPKTLNLKQLLDAFVRHRRE 360

Query: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
           VVTRRTI+ELRKARER HILEGL +ALANIDEIIELI+ + + AEAKE LIA+GW  G+V
Sbjct: 361 VVTRRTIYELRKARERGHILEGLTVALANIDEIIELIKASPSAAEAKEKLIAKGWSPGDV 420

Query: 420 AAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQ 479
            AMLERAG DA RP+ L   YG+R+G Y L+ +QAQAILDLRLH+LTGLE EK+ +EYK+
Sbjct: 421 MAMLERAGQDACRPDDLPEIYGLREGLYHLSPEQAQAILDLRLHRLTGLETEKLQNEYKE 480

Query: 480 LLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVV 539
           +L++IA L+ IL   ERL++VIREELEAI   F D RRTEIT++  D+ + +LI  ED+V
Sbjct: 481 ILDKIADLLDILGDPERLLQVIREELEAIVTEFGDERRTEITSSRRDLTIADLIDEEDLV 540

Query: 540 VTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTY 599
           VT+SH GY K Q + DY+AQRRGG+GK+AT MK+ED++E+LLVAN+HD IL FS RGK Y
Sbjct: 541 VTISHSGYAKTQAVEDYQAQRRGGRGKAATSMKDEDFVEKLLVANSHDTILCFSNRGKVY 600

Query: 600 RMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSL 659
            ++V+++P ASR +RG+P+VN+LPL+E ERIT  LPV ++ ED+F+ MAT  G VKKT L
Sbjct: 601 WLRVFEIPRASRASRGRPMVNILPLDEGERITTFLPVRDYPEDQFVLMATSAGVVKKTPL 660

Query: 660 DQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQ 719
             F+  R++GLIAL+L + D+LIG  IT G++E+MLFS  GK VRF E            
Sbjct: 661 PNFSRPRSSGLIALSLDEGDTLIGAAITKGDAEVMLFSTAGKAVRFNE------------ 708

Query: 720 PVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKR 779
                        + VRPM RTA GVRG+K+  G  VVSLI+P+  G +LT +ENGYGKR
Sbjct: 709 -------------EAVRPMSRTARGVRGIKMPQGHHVVSLIIPQDGGVILTASENGYGKR 755

Query: 780 TSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQV 839
           T++ E+PT  RG+QGV++++ SERNG++V A+Q+ +GDE M+I++ GTLVRTR  EVS +
Sbjct: 756 TAIDEFPTYSRGSQGVIAMQCSERNGNLVTALQLFDGDEMMLISDKGTLVRTRTDEVSVL 815

Query: 840 GRNTQGVTLIRTS-EGESVVGLQRIDEIEESELPEGEEALVENDAPVAQDDDGE 892
            RNTQGV LI+ S E E +VG++RI E ++ EL      +V +++P  +  +GE
Sbjct: 816 SRNTQGVRLIKLSQEDERLVGVERIAETDDEELDSEGNPIVADESP-EEGQEGE 868