Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 913 a.a., DNA gyrase, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  762 bits (1967), Expect = 0.0
 Identities = 416/913 (45%), Positives = 574/913 (62%), Gaps = 86/913 (9%)

Query: 11  VNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVV 70
           ++I +E++SSYLDYAMSVIV RA+PD+RDGLKPVHRR+L+AM+  GN   KAY+KSAR V
Sbjct: 25  ISIAEEMKSSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHETGNTHEKAYRKSARPV 84

Query: 71  GDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKI 130
           GDV+GKYHPHGDSA+YD +VRMAQ FS+   L+DGQGNFGS+DGD+ AAMRYTEVRM K 
Sbjct: 85  GDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYTEVRMDKP 144

Query: 131 AHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEV 190
           A  LLAD++KETVD+  NYDG ++ P VLP + PN+L+NGA GIAVGMATNIPPHNLGEV
Sbjct: 145 AAALLADIEKETVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEV 204

Query: 191 IDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIET 250
           ID  LA I+   + +++LM YIP PDFPT   I GR G   AY  GRG V +R+K  IE 
Sbjct: 205 IDATLALIETPDLEVEDLMQYIPAPDFPTGGQILGRGGARKAYLEGRGSVIIRAKTRIEE 264

Query: 251 DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDA 310
            +  +  I++ EIPYQVNK+ +IEKIAELV+EK++EGI+ ++DESD+ G+R+VIE KRDA
Sbjct: 265 LRKDRYAIVLDEIPYQVNKSSMIEKIAELVREKRIEGIAHVQDESDRVGVRVVIELKRDA 324

Query: 311 VGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELR 370
             EVVLN LY  T +QT+FG NM+AL+ G+P+   LK+ L  F+  R EVV RRT ++LR
Sbjct: 325 TPEVVLNQLYRFTPMQTSFGCNMLALNGGRPEQLTLKDFLSSFISFREEVVARRTAYDLR 384

Query: 371 KARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDA 430
           KARER+H+L GLA+A++N+DE++  IR +A  AEA+E L+ R W   ++A  +       
Sbjct: 385 KARERSHVLCGLAVAVSNVDEVVATIRASADAAEAREKLMTRRWPAADIADYIRLID--- 441

Query: 431 ARPEWLEPQYGI-RDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMH 489
                 +P + +  DG Y L+E QA+AILDLRL +LT +  +++ DE ++L  +I   + 
Sbjct: 442 ------DPTHTMNEDGTYNLSETQARAILDLRLQRLTQIGVKEVTDELQELAAKIQEYLD 495

Query: 490 ILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEGYVK 549
           IL S  R+M +I +EL  ++  F+  RRTEIT  + D++ E+LI RED+VVT++  GY+K
Sbjct: 496 ILRSRSRIMAIISDELREVKDQFAVPRRTEITDWSGDMEDEDLIEREDMVVTVTSGGYIK 555

Query: 550 YQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLA 609
              L ++ AQRRGGKG +    KE+D +  L VANTH  +L+F+T G  Y++K ++LP  
Sbjct: 556 RTPLVEFRAQRRGGKGLAGMATKEDDVVTTLFVANTHTPLLVFTTDGMVYKLKTWRLPSG 615

Query: 610 SRTARGKPIVNLLPLEENERITAILPVTEFSE---DKFIFMATGDGTVKKTSLDQFANVR 666
            R ARGK +VN+LP++    I AI+PV    E   D  I  AT  G V++ +L  F NV 
Sbjct: 616 GRNARGKALVNVLPIDPGTSIAAIMPVDRAEEDWADLQIVFATSAGDVRRNALSDFTNVM 675

Query: 667 ANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENG 726
            NG IA+ L +  SL+   I   E ++ML +  G+ +RF+ ++                 
Sbjct: 676 RNGKIAMKLPEGVSLVKARICSEEDDVMLVTALGRAIRFRTTDVRV-------------- 721

Query: 727 QPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPK----------------------- 763
                FK     GR + GVRG++LA+GD+VVS+ V +                       
Sbjct: 722 -----FK-----GRDSTGVRGVRLAEGDRVVSMAVIRHFVADPQERAAYLKMRRAVAGLS 771

Query: 764 --------------------------TEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVS 797
                                      E  +LT+TE G GK +S  +YP +GRG QGV +
Sbjct: 772 EEAESEDEDTVEAGQLSPERYAEMSAAEDLILTITEGGTGKISSSHDYPVRGRGGQGVTA 831

Query: 798 IKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESV 857
           +  + R G +V    V   D+ M+ T+ G  +R  V  +S   R   GV +  T+ GE V
Sbjct: 832 MDKAMRGGPLVACFPVEIDDQIMLATSTGQSIRCPVDGISFRSRAAGGVKVFNTAPGEQV 891

Query: 858 VGLQRIDEIEESE 870
           V +  I +  E++
Sbjct: 892 VSVAYIADRGEAD 904