Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., DNA gyrase subunit A from Ralstonia sp. UNC404CL21Col

 Score = 1038 bits (2685), Expect = 0.0
 Identities = 538/913 (58%), Positives = 671/913 (73%), Gaps = 45/913 (4%)

Query: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
           M   AKE  PV++E+E+RSSYL YAMSVIVGRALPDVRDGLKPVHRR L++M+ L NDWN
Sbjct: 1   MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN 60

Query: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           + YKKSAR+VGDVIGKYHPHGD+AVYDTIVRMAQ FSLRYMLVDGQGNFGS+DGD+AAAM
Sbjct: 61  RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
           RYTE+R+SKIAHELLADLDKETV++ PNYDG+E  P+VLP +IPNLLING+SGIAVGMAT
Sbjct: 121 RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
           NIPPHNL EV+DGCL  + N   T+DEL++ IP PDFPTA +I G  G+ + Y+TGRG+V
Sbjct: 181 NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV 240

Query: 241 YMRSKAEIE-TDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
            MR+K   E  D+  ++ IIV E+PYQVNK  L+E+IAELV EK++EGIS +RDESDK G
Sbjct: 241 VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG 300

Query: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
           MR+VIE KR  V EVVLNNLY NTQLQ TFG+NMVAL +GQP+L NL++ML+CF+ HRRE
Sbjct: 301 MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE 360

Query: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
           VVTRRT+F+LRKARER HILEGLA+ALANIDE I +I+ A TP  AK  L++R WD G V
Sbjct: 361 VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMSRSWDSGLV 420

Query: 420 AAMLERA------GTDAARPEWLEPQYGIR-DGKYFLTEQQAQAILDLRLHKLTGLEHEK 472
             ML RA      G  A RPE L P +G++ DG Y L++ QAQ IL +RL +LTGLE +K
Sbjct: 421 RDMLVRAESETSGGGAAYRPEGLLPAFGMQADGLYKLSDTQAQEILQMRLQRLTGLEQDK 480

Query: 473 ILDEYKQLLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEEL 532
           I+ EY++++ +IA L+ ILA  ER+  +I EEL AIRA F D RR++I     ++D E+L
Sbjct: 481 IVQEYREVMAQIADLLDILARPERITAIIVEELTAIRAEFGDERRSQIEHNATELDTEDL 540

Query: 533 IAREDVVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLF 592
           I  +D+VVTLSH GY+K Q +S+Y AQ+RGG+GK A   KE+D+I+ L VANTHD IL F
Sbjct: 541 ITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF 600

Query: 593 STRGKTYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDG 652
           S RG+ Y +KV+++P  SR +RG+PIVN+ PL   E+I  ILPV +F E  F+FMAT  G
Sbjct: 601 SNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPVKQFDEQHFVFMATSKG 660

Query: 653 TVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETA 712
           TVKKT+L +F+N R  G+IA++L + D LIG DITDG+ ++MLFS  GK VRF E++   
Sbjct: 661 TVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVRFDEND--- 717

Query: 713 VVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTE------- 765
                                 VRPMGR A GVRGM L +  QV++++V   E       
Sbjct: 718 ----------------------VRPMGRQARGVRGMNLEENQQVIAMLVAPAETAGEGAQ 755

Query: 766 ---GDVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMI 822
              G VLT TENGYGKRT +SEY   GRGT+G+++I+ SERNG VV A  VA  DE M+I
Sbjct: 756 SGAGSVLTATENGYGKRTPISEYTRHGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLI 815

Query: 823 TNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRI--DEIEESELPEGEEALVE 880
           T  G L+RTRV E+ ++GR TQGVTLI   EG  + GLQR+   + E ++  EG +A   
Sbjct: 816 TTGGVLIRTRVDEIREMGRATQGVTLISVGEGNKLSGLQRVMESDAEGADAVEGADAADA 875

Query: 881 NDAPVAQDDDGEQ 893
                AQ DD  +
Sbjct: 876 APGADAQSDDSSE 888