Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., DNA gyrase subunit A from Phocaeicola vulgatus CL09T03C04

 Score =  786 bits (2029), Expect = 0.0
 Identities = 411/884 (46%), Positives = 588/884 (66%), Gaps = 71/884 (8%)

Query: 8   ITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSA 67
           I  +NIE+E++SSY+DY+MSVIV RALPDVRDG KPVHRR+L+ M  LGN  +KAYKKSA
Sbjct: 7   IIKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILYGMIELGNTSDKAYKKSA 66

Query: 68  RVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRM 127
           R+VG+V+GKYHPHGDS+VY  +VRMAQ +++RY LVDGQGNFGS+DGDS AAMRYTE R+
Sbjct: 67  RIVGEVLGKYHPHGDSSVYGALVRMAQDWAMRYPLVDGQGNFGSVDGDSPAAMRYTEARL 126

Query: 128 SKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNL 187
            KI  E++ DL KETVD+  N+D T Q P V+PT+IPNLL+NGASGIAVGMATN+P HNL
Sbjct: 127 KKIGEEMMQDLYKETVDFQNNFDDTLQEPTVMPTRIPNLLVNGASGIAVGMATNMPTHNL 186

Query: 188 GEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAE 247
            EVID C+AYIDN  I I+ LM Y+  PDFPT   I G  G+ DAY+TGRG+V MR+KAE
Sbjct: 187 SEVIDACIAYIDNNDIDIEGLMQYVKAPDFPTGGYIYGISGVRDAYETGRGRVVMRAKAE 246

Query: 248 IETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECK 307
           IET     + IIV+EIPY VNK  LIE IA LV +KK++GIS + DESD++GMRIVI+ K
Sbjct: 247 IETHTT-HDKIIVNEIPYNVNKKELIENIASLVNDKKIDGISYVNDESDREGMRIVIDVK 305

Query: 308 RDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIF 367
           RDA   VVLN L+  T LQT+FG+N +AL +G+PK+ NLK++++ FV+HR +VV RRT +
Sbjct: 306 RDANASVVLNKLFKMTALQTSFGVNNIALVHGRPKMLNLKDLIRYFVEHRHDVVIRRTQY 365

Query: 368 ELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAG 427
           +LRKA+ERAHILEGL +A  NIDE+I +IR A TP +A  GLI R               
Sbjct: 366 DLRKAQERAHILEGLIIASDNIDEVIRIIRAAKTPNDAIAGLIER--------------- 410

Query: 428 TDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAAL 487
                              + L+E QA+AI+++RL +LTGL  +++  EY++++++IA  
Sbjct: 411 -------------------FNLSEIQARAIVEMRLRQLTGLMQDQLHAEYEEVMKQIAYY 451

Query: 488 MHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEGY 547
             IL++ E   +VI++EL  ++  + DARR+EI  ++ + + E+  A + +V+T+SH GY
Sbjct: 452 EEILSNDELCKKVIKDELVEVKEKYGDARRSEIVYSSEEFNPEDFYADDQMVITISHMGY 511

Query: 548 VKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLP 607
           +K   LS++ AQ RGG G   ++ ++ED++E +  A  H+ ++ F+ +GK Y +KVY++P
Sbjct: 512 IKRTPLSEFRAQNRGGVGSKGSETRDEDFVEHIYPATMHNTMMFFTQKGKCYWLKVYEIP 571

Query: 608 LASRTARGKPIVNLLPLEENERITAILPV-----TEFSEDKFIFMATGDGTVKKTSLDQF 662
             ++ A+G+ I NLL ++ ++ +TA L V     TEF    ++   T +G +KKT L+Q+
Sbjct: 572 EGTKNAKGRAIQNLLNIDSDDVVTAYLRVKNLNDTEFINSHYVLFCTKNGVIKKTLLEQY 631

Query: 663 ANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVL 722
           +  R NG+ A+ +R++D +I V +T+G++EI++ ++ G+ +RF ES              
Sbjct: 632 SRPRQNGVNAITIREDDKVIEVRMTNGDNEIIIANRNGRAIRFHES-------------- 677

Query: 723 DENGQPEIKFKGVRPMGRTAAGVRGMKLAD--GDQVVSLIV---PKTEGDVLTVTENGYG 777
                       VR MGRTA GVRGM L +  GD+V+ +I    P+ E  ++ V+E GYG
Sbjct: 678 -----------AVRVMGRTATGVRGMTLEEDGGDEVIGMICIKDPEAE-SIMVVSEQGYG 725

Query: 778 KRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVS 837
           KR+ + +Y    RG +GV ++ ++++ G +V    V + ++ M+I  +G  +R +VAEV 
Sbjct: 726 KRSDIEDYRKTNRGGKGVKTLNITDKTGKLVAIKSVTDENDLMIINKSGITIRLKVAEVR 785

Query: 838 QVGRNTQGVTLIRTSEGESVVGLQRIDEIEESELPEGEEALVEN 881
            +GR TQGV LI   +    +G       EE    E     +EN
Sbjct: 786 IMGRATQGVRLINLEKRNDQIGSVCKVTSEEEVTDENSNTDLEN 829