Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., DNA gyrase subunit A from Burkholderia phytofirmans PsJN

 Score = 1029 bits (2661), Expect = 0.0
 Identities = 528/888 (59%), Positives = 660/888 (74%), Gaps = 41/888 (4%)

Query: 17  LRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGK 76
           +R SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ L NDWN+AYKKSAR+VGDVIGK
Sbjct: 1   MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVIGK 60

Query: 77  YHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLA 136
           YHPHGD+AVYDTIVRMAQ FSLRYMLVDGQGNFGS+DGD+AAAMRYTE+RM+KI HELLA
Sbjct: 61  YHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAMRYTEIRMAKIGHELLA 120

Query: 137 DLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLA 196
           D+DKETVD+ PNYDG+E  PA+LP +IPNLLING+SGIAVGMATNIPPHNL EV+D C  
Sbjct: 121 DIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQH 180

Query: 197 YIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEI-ETDKNGK 255
            + N   TIDEL++ IP PDFPTA +I G  G+ D Y+TGRG+V MR+     E D+  +
Sbjct: 181 LLKNPEATIDELIEIIPAPDFPTAGIIYGVAGVRDGYRTGRGRVVMRALTHFEEIDRGQR 240

Query: 256 ETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDAVGEVV 315
            +IIV E+PYQVNK  L+E+IAELV EKK+EGIS +RDESDK GMR+VIE KR  V EVV
Sbjct: 241 MSIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKRGEVPEVV 300

Query: 316 LNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKARER 375
           LNNLY  TQLQ TFG+NMVAL +GQPKL NLKEML CF+ HRREV+TRRT++ELRKARER
Sbjct: 301 LNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRREVLTRRTVYELRKARER 360

Query: 376 AHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERA--------G 427
            H+LEGLA+ALANIDE I +I+ A TP  AK+ L+AR WD   V  ML RA        G
Sbjct: 361 GHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLVREMLSRAETENATAGG 420

Query: 428 TDAARPEWLEPQYGIR-DGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAA 486
            DA RP+ L P +G++ DG Y L++ QAQ IL +RL +LTGLE +KI+ EY++++ +IA 
Sbjct: 421 RDAYRPDGLNPSFGMQSDGLYRLSDTQAQEILQMRLQRLTGLEQDKIIGEYREVMAQIAD 480

Query: 487 LMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEG 546
           L+ ILA  ER+  +I +EL +I+A F DARR++I     +++ E+LI  +++VVT+SH G
Sbjct: 481 LLDILARPERITAIIVDELTSIKAEFGDARRSKIELNATELNTEDLITPQEMVVTMSHAG 540

Query: 547 YVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQL 606
           YVK Q LS+Y AQ+RGG+GK AT MKE+D+I+ L +ANTHD+IL FS RG+ Y +KVY++
Sbjct: 541 YVKSQPLSEYSAQKRGGRGKQATAMKEDDWIDTLFIANTHDHILCFSNRGRVYSVKVYEV 600

Query: 607 PLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLDQFANVR 666
           P  SR +RG+PI+N+ PL+E E+IT +LPV EFS DKF+FM T  GTVKKT L+ F  V 
Sbjct: 601 PQGSRNSRGRPIINIFPLQEGEKITVVLPVKEFSADKFVFMGTALGTVKKTPLEAFGRVL 660

Query: 667 ANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENG 726
             G+IA+ L D D LIG  ITDG+ ++MLFS  GK VRF E++                 
Sbjct: 661 RKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDEND----------------- 703

Query: 727 QPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTE-GDVLTVTENGYGKRTSLSEY 785
                   VRPMGR A GVRGM+L DG  V++L+V   E   VLT TENG+GKRT ++EY
Sbjct: 704 --------VRPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEY 755

Query: 786 PTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQG 845
              GRGT+G+++I+ SERNG VV A  V +  + M+ITN G L+RTRV+E+ ++GR TQG
Sbjct: 756 TRHGRGTKGMIAIQTSERNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQG 815

Query: 846 VTLIRTSEGESVVGLQRIDEIEESELPEGEEALVENDAPVAQDDDGEQ 893
           VTLI   EG  + GLQ++ E E     EG+      + P   D+ GE+
Sbjct: 816 VTLISLDEGTKLSGLQQVAEAEAESDAEGDA-----EGPAEGDNGGEE 858