Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 782 a.a., ribonucleotide-diphosphate reductase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score = 1237 bits (3201), Expect = 0.0
 Identities = 594/762 (77%), Positives = 686/762 (90%), Gaps = 1/762 (0%)

Query: 1   MNQQLTVTKRDGRKENIDLDKIHRVITWAAEGLQNVSVSQVELRAHIQFYDGITTSDIHE 60
           MN  +TVTKR G +E IDLDKIHRV+TWAA+GL+NVSVS+VELR+H+QF++GI T  IHE
Sbjct: 21  MNSNMTVTKRSGEREQIDLDKIHRVVTWAAKGLKNVSVSEVELRSHLQFFEGIPTEAIHE 80

Query: 61  TIIKSAADLISEETPDYQYLAARLAVFHLRKKAYGQYEPPTLLAHVTKMVEKGKYDKHLL 120
           TIIK+AADLIS E+PDYQ+LAARLAVFHLRKKA+GQ+EPP L  HV K+VE GKYD+H+L
Sbjct: 81  TIIKAAADLISPESPDYQFLAARLAVFHLRKKAFGQFEPPKLYDHVVKLVEMGKYDRHIL 140

Query: 121 EDYTREELELMDQFIDHRRDLDFSYAAVKQLEGKYFVQNRVTGQIYESAQFLYILVAACL 180
           EDYT+EEL+++D +IDH RD++FSYAAVKQLEGKY VQNRVT ++YESAQFLYILVAACL
Sbjct: 141 EDYTKEELDVLDSYIDHWRDMNFSYAAVKQLEGKYLVQNRVTHEVYESAQFLYILVAACL 200

Query: 181 FAKYPKETRLDYIKRFYDATSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 240
           FA YPKETRL Y+K FYDA STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT
Sbjct: 201 FAGYPKETRLKYVKDFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT 260

Query: 241 ASSIVRYVSQRAGIGINAGRIRALGSEIRGGEAFHTGCIPFYKYFQTAVKCCSQGGVRGG 300
           ASSIV+YVSQRAGIG+NAGRIRALGS IRGGEAFHTGC+PFYKYFQTAVK CSQGGVRGG
Sbjct: 261 ASSIVKYVSQRAGIGVNAGRIRALGSPIRGGEAFHTGCLPFYKYFQTAVKSCSQGGVRGG 320

Query: 301 AATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLFSPSD 360
           AAT+FYP+WH E ESLLVLKNNRGVE+NR+RH+DYGVQLNKLMY+RL++G NITLFSPSD
Sbjct: 321 AATLFYPIWHLEVESLLVLKNNRGVEDNRIRHLDYGVQLNKLMYQRLIKGENITLFSPSD 380

Query: 361 VPGLYDAFFQDQDEFERLYVKYENDPSIKKKTVKALEIFTLLMQERASTGRIYIQNVDHC 420
           VPGLYDAFF++QDEFERLY KYE +PSI+KK++KA+E+F+L+MQERASTGRIY+QNVDHC
Sbjct: 381 VPGLYDAFFENQDEFERLYTKYEQEPSIRKKSLKAVELFSLMMQERASTGRIYVQNVDHC 440

Query: 421 NTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNLGAIESLDDFEE 480
           NTHSPFD++VAP+RQSNLCLEIALPT PL +V+D +GEIALCTLSA NLGAIE+L++ E 
Sbjct: 441 NTHSPFDSSVAPIRQSNLCLEIALPTKPLDSVDDTNGEIALCTLSALNLGAIENLEELEG 500

Query: 481 LSDLVVRALDALLDYQDYPLPAARRSSMNRRTLGVGVINYAYYLAKNGVKYSDGSANGLT 540
           LSDL VRALD+LLDYQDYP+ AA+  SMNRRTLG+GVIN+A YLAKNG KYSDGSAN LT
Sbjct: 501 LSDLAVRALDSLLDYQDYPIKAAKLGSMNRRTLGIGVINFANYLAKNGKKYSDGSANNLT 560

Query: 541 HRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYAKGLMPIDTYKKDIDLVCAEPLHYDWD 600
           H+TFEA+Q++LL+ASM LAKE+G CP FHET Y++G++PIDTYK+D+D +C EPLH DW+
Sbjct: 561 HKTFEAIQFNLLKASMNLAKEKGACPAFHETTYSQGILPIDTYKRDLDKICDEPLHLDWE 620

Query: 601 KLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPPRGYVSVKASKDGILKQVVPEFT 660
            LR +I  +GLRNSTL+ALMPSETSSQISNATNGIEPPRG +SVKASKDG LKQVVP+F 
Sbjct: 621 GLRADIKHYGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKASKDGQLKQVVPDFD 680

Query: 661 RLKENYELLWNIGSNDGYLHLVGIMQKFVDQAISANTNYDPSNFDSGKVPMKKLLQDLLT 720
            L+  YELLW + SNDGYL LVGIMQKFVDQAISANTNYDP+ F+  KVPM+ LL+DLLT
Sbjct: 681 ELRNAYELLWQMPSNDGYLQLVGIMQKFVDQAISANTNYDPAKFEGRKVPMQLLLKDLLT 740

Query: 721 AYKFGVKTLYYHNTRDGAKDEQTDATVKVQEDD-CASGACKI 761
           AYK G+KTLYYHNTRDGA D+  D  V  +EDD CA GACKI
Sbjct: 741 AYKLGLKTLYYHNTRDGATDQHDDIAVVEKEDDGCAGGACKI 782