Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., Ribonucleoside-diphosphate reductase (alpha chain) NrdE (ribonucleotide reductase small subunit) (R1F protein) from Mycobacterium tuberculosis H37Rv

 Score =  177 bits (448), Expect = 2e-48
 Identities = 167/660 (25%), Positives = 284/660 (43%), Gaps = 55/660 (8%)

Query: 109 MVEKGKYDKHLLEDYTREELELMDQFIDHRRDLDFSYAAVKQLE---GKYFVQNRVTGQI 165
           ++ +  Y++ +L+ Y+R  ++ +         LD +YA   +     G +      T + 
Sbjct: 45  LIRENYYEREVLDQYSRNFVKTL---------LDRAYAKKFRFPTFLGAFKYYTSYTLKT 95

Query: 166 YESAQFL------YILVAACLFAKYPKETRLDYIKRFYDATSTFKISLPTPIMSGVRTPT 219
           ++  ++L       ++VA  L A    +T L  +         F+ + PT + SG +   
Sbjct: 96  FDGKRYLERFEDRVVMVALTLAAG---DTALAELLVDEIIDGRFQPATPTFLNSGKKQRG 152

Query: 220 RQFSSCVLIECGDSLDSINATASSIVRYVSQRAGIGINAGRIRALGSEIRGGEAFHTGCI 279
              S C L+   D+++SI  + +S ++   +  G+ +    IR  G+ I+  E   +G I
Sbjct: 153 EPVS-CFLLRVEDNMESIGRSINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVI 211

Query: 280 PFYKYFQTAVKCCSQGGVRGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQL 339
           P  K  + A    +Q G R GA  V+    H +    L  K     E+ R++ +  GV +
Sbjct: 212 PIMKLLEDAFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVI 271

Query: 340 NKLMYKRLVEGGNITLFSPSDVPGLYDAFFQDQDEFERLYVKYENDPSIKKKTVKALEIF 399
             + ++      ++ LFSP DV  +Y   F D    E+ Y +  +D  I+K  +KA E F
Sbjct: 272 PDITFELAKRNDDMYLFSPYDVERVYGVPFADISVTEK-YYEMVDDARIRKTKIKAREFF 330

Query: 400 TLLMQERASTGRIYIQNVDHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDES--- 456
             L + +  +G  YI   D  N  +P D  +     SNLC EI   ++P    ED S   
Sbjct: 331 QTLAELQFESGYPYIMFEDTVNRANPIDGKIT---HSNLCSEILQVSTPSLFNEDLSYAK 387

Query: 457 -GEIALCTLSAFNLGAIESLDDFEELSDLVVRALDALLDYQDY-PLPAARRSSMNRRTLG 514
            G+   C L + N+       DF +  ++ +RAL A+ D      +P+  + + +   +G
Sbjct: 388 VGKDISCNLGSLNIAKTMDSPDFAQTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIG 447

Query: 515 VGVINYAYYLAKNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQG-RCPLFHETNY 573
           +G +N   YLA+  + Y        T+  F  + YH LRAS ++A E+G     F  + Y
Sbjct: 448 LGQMNLHGYLARERIFYGSDEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKY 507

Query: 574 AKGLMPIDTYKKDI-------------DLVCAEPLHYDWDKLRHEIMEHGLRNSTLTALM 620
           A G    D Y   I             D     P   DW +L+  +  HG+ N  L A+ 
Sbjct: 508 ASGEF-FDKYTDQIWEPKTQKVRQLFADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVP 566

Query: 621 PSETSSQISNATNGIEPPRGYVSV-KASKDGILKQVVPEFTRLK-ENYELLWNIGSNDGY 678
           P+ + S I+++T+ I P    V + K  K G +    P  T    E YE  + IG  +  
Sbjct: 567 PTGSISYINHSTSSIHPIVSKVEIRKEGKIGRVYYPAPYMTNDNLEYYEDAYEIG-YEKI 625

Query: 679 LHLVGIMQKFVDQAISANTNYDPSNFDSGKVPMKKLLQDLLTAYKFGVKTLYYHNTRDGA 738
           +       + VDQ +S         F       + + +  + A++ G+KTLYY   R  A
Sbjct: 626 IDTYAAATQHVDQGLSLTL------FFKDTATTRDVNKAQIYAWRKGIKTLYYIRLRQMA 679