Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 994 a.a., ribonucleotide-diphosphate reductase subunit alpha from Herbaspirillum seropedicae SmR1

 Score =  260 bits (665), Expect = 2e-73
 Identities = 206/686 (30%), Positives = 318/686 (46%), Gaps = 55/686 (8%)

Query: 4   QLTVTKRDGRKENIDLDKIHRVITWAAEGLQNVSVSQVELRAHIQ-FYDGITTSDIHETI 62
           QL VT+ DG+   +D++++  +I  A  GL+     +  L   ++  YDG+   +++++ 
Sbjct: 155 QLHVTE-DGQSRPLDINEVRSLIAAACVGLEEHVDGEAILAETVKNLYDGVPVEELYKSA 213

Query: 63  IKSAADLISEETPDYQYLAARLAVFHLRKKAYGQY-----EPPTLLAHVTKMVEKGKYDK 117
           I +A  L+ E+ P Y  + +RL +  +RK+ +G+       P   L +  + V+KG   +
Sbjct: 214 ILAARALM-EKDPAYSQVTSRLLMHTIRKEVFGKEVAQADAPAEYLEYFPQYVKKGIEAE 272

Query: 118 HLLEDYTREELELMDQFIDHRRDLDFSYAAVKQLEGKYFVQNRVTGQIYESAQFLYILVA 177
            L     + +L  +   +   RDL F Y  ++ L  +YF+   + G   E  Q  Y+ VA
Sbjct: 273 LLDTKLAQFDLAKLAAALKPERDLQFGYIGLQTLYDRYFLH--IGGTRIEMPQAFYMRVA 330

Query: 178 ACL-FAKYPKETRLDYIKRFYDATSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDS 236
             L   +  +ETR      FYD  S+F     TP +    T   Q SSC L    D LD 
Sbjct: 331 MGLALNEIDRETRAI---EFYDLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADDLDG 387

Query: 237 INATASSIVRYVSQRAGIGINAGRIRALGSEIRGGEAFHTGCIPFYKYFQTAVKCCSQGG 296
           I               G+G +   +RALG+ I+G      G +PF K         +QGG
Sbjct: 388 IYEAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 447

Query: 297 VRGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLF 356
            R GA   +   WH + E  L L+ N G +  R   M+    +  L  KR++E G  TLF
Sbjct: 448 KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLF 507

Query: 357 SPSDVPGLYDAFFQDQDEFERLYVKYENDPSIKK----KTVKALEIFTLLMQERASTGRI 412
           SPSD P L+D F +    FE  Y  YE   +  +    K V+A +++  ++     TG  
Sbjct: 508 SPSDTPDLHDKFGR---AFEEAYTAYEAKAARGELKLFKKVQANDLWRKMLSMLFETGHP 564

Query: 413 YIQNVDHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNLGA- 471
           +I   D CN  SP    V  V  SNLC EI L T+          EIA+C L + NL A 
Sbjct: 565 WITFKDPCNIRSP-QQHVGVVHSSNLCTEITLNTN--------DSEIAVCNLGSVNLPAH 615

Query: 472 -IESLDDFEELSDLV---VRALDALLDYQDYPLPAARRSSMNRRTLGVGVINYAYYLAKN 527
            +    D  +L   +   +R LD ++D   Y +  AR S++  R +G+G++ +   L   
Sbjct: 616 LVNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGMGIMGFQDCLHIK 675

Query: 528 GVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYAKGLMPIDTYKKDI 587
            V Y+   A     R+ EA+ Y+   AS +LA+E+GR   +  + + +G++P D+ K   
Sbjct: 676 RVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDRGILPQDSLK--- 732

Query: 588 DLVCAEPLHY---------DWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPP 638
            L+  E   Y         DW  LR  I EHG+RNS   A+ P+ T S I   +  IEP 
Sbjct: 733 -LLAQERGGYLETDSTETLDWAALRARIAEHGMRNSNCVAIAPTATISNIIGVSACIEPT 791

Query: 639 RGYVSVKASKDGILKQVVPEFTRLKE 664
              + VK++  G       EFT + E
Sbjct: 792 YQNLYVKSNLSG-------EFTEINE 810