Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 69.3 bits (168), Expect = 7e-16
 Identities = 103/493 (20%), Positives = 188/493 (38%), Gaps = 87/493 (17%)

Query: 182 AKYPKETRLDYIKRFYDATSTFKISLPTPI-MSGVRTPTR--QFSSCVLIECGDSLDSIN 238
           AKYP        K  YD    FK  +P    M+G+    +    S+C +I    + DS  
Sbjct: 14  AKYPNALTA---KELYDLLDHFKYIVPQGSPMTGIGNDYQVASLSNCFVIGVDGAADSYG 70

Query: 239 ATAS---SIVRYVSQRAGIGINAGRIRALGSEIRGGEAFHTGCIPFYKYFQTAVKCCSQG 295
           A        V+ + +R G+G +   IR  GS ++      TG +PF + +  + +  +Q 
Sbjct: 71  AIIKIDEEQVQLMKRRGGVGHDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQD 130

Query: 296 GVRGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITL 355
           G R GA  +   + H ++E+ +  K   G                       V G N+++
Sbjct: 131 G-RRGALMLSVSIKHPDSEAFIDAKMTEG----------------------KVTGANVSV 167

Query: 356 FSPSDVPGLYDAFFQDQDEFERLYVKYENDPSIKKKTVKALEIFTLLMQ------ERAST 409
                   L DAF Q   + E+ Y++     S    T K ++  TL  +      + A  
Sbjct: 168 -------KLDDAFMQAAVD-EKPYIQQYPIESANPTTTKEIDASTLWKKIVHNAWKSAEP 219

Query: 410 GRIYIQNVDHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNL 469
           G ++   +   +    +         +N C EI  P  P  +    +  +    ++ F  
Sbjct: 220 GVLFWDTIIRESVPDCYADLGYKTVSTNPCGEI--PLCPYDSCRLLAINLYSYVVNPFKP 277

Query: 470 GAIESLDDFEELSDLVVRALDALLDYQDYPLPAA-------------------------R 504
            A    + F++   L  R +D ++D +   +                            +
Sbjct: 278 DAYFDFELFKKHVALAQRIMDDIIDLELEKIERIMEKIDQDPEGEEVKHAERNLWNKIYK 337

Query: 505 RSSMNRRTLGVGVINYAYYLAKNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGR 564
           +S   RRT GVG+      LA  G++Y    A   + +  + +     R+S+++AKE+G 
Sbjct: 338 KSGQGRRT-GVGITAEGDMLAALGLRYGTEEATEFSEKVHKTVALGAYRSSVEMAKERGA 396

Query: 565 CPLFHETNYAKGLMPIDTYKKDIDLVCAEPLHYDWDKLRHEIMEHGLRNSTLTALMPSET 624
             ++  +N  +   P      + D            +L  E+ ++G RN     + P+ T
Sbjct: 397 FEIY--SNEREQNNPFIQRLAEAD-----------PELYAEMKKYGRRNIACLTIAPTGT 443

Query: 625 SSQISNATNGIEP 637
           +S ++  T+GIEP
Sbjct: 444 TSLMTQTTSGIEP 456