Pairwise Alignments

Query, 377 a.a., ribonucleotide-diphosphate reductase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., ribonucleoside-diphosphate reductase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  570 bits (1470), Expect = e-167
 Identities = 280/377 (74%), Positives = 317/377 (84%), Gaps = 1/377 (0%)

Query: 1   MAYSTFTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDR 60
           M YSTF Q  ND  +EPMF GQ VNVARYDQQKYE+FEKLIEKQLSFFWRPEEVDVS D+
Sbjct: 1   MTYSTFCQTPNDATREPMFFGQSVNVARYDQQKYEVFEKLIEKQLSFFWRPEEVDVSRDK 60

Query: 61  IDYGKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHS 120
           IDY  LPDHEKHIFISNLKYQTLLDSIQGRSPNVA LPLVSLPELETWIETWSFSETIHS
Sbjct: 61  IDYNSLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHS 120

Query: 121 RSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDLIELTNDYHRYGEGQHQING 180
           RSYTHIIRNIVNDP+V+FDDIV N  I++RA DIA +YD LI+LT  YH  GEG H I+G
Sbjct: 121 RSYTHIIRNIVNDPSVIFDDIVVNHEILRRATDIAEFYDHLIKLTQIYHLLGEGTHVIDG 180

Query: 181 ETITVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEA 240
           E + V+ + LKK LYLC+MSVNALEAIRFYVSFACSFAFAER+LMEGNAKII+LIARDEA
Sbjct: 181 EPVEVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIRLIARDEA 240

Query: 241 LHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGL 300
           LHL  TQH+L +++ G DD    ++A EC+QE+++LF +AAEQEKEWA+YLFKDGSMIGL
Sbjct: 241 LHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGSMIGL 300

Query: 301 NKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEISSYLV 360
           N+ ILCQYVEYITN RM++V L   Y A   NP+PW+  WL SD VQVAPQE E+SSYLV
Sbjct: 301 NEQILCQYVEYITNQRMKSVNLPQPY-AEQTNPLPWMKNWLESDAVQVAPQEVEVSSYLV 359

Query: 361 GQIDNEVSADDFEGFEL 377
           GQID  V +D+F  F+L
Sbjct: 360 GQIDAAVDSDEFLDFDL 376