Pairwise Alignments

Query, 415 a.a., competence/damage-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., competence/damage-inducible protein CinA (RefSeq) from Shewanella amazonensis SB2B

 Score =  263 bits (672), Expect = 7e-75
 Identities = 159/423 (37%), Positives = 239/423 (56%), Gaps = 26/423 (6%)

Query: 5   LKIAMLSTGEEVLHGDIVDSNAAWLAREFYQHGFSLAKRATVGDSLPALVEELMMLSFNS 64
           +K+ M+ TGEEVL G IVD+NAAW A    ++G  + +R TVGD L  LV      S ++
Sbjct: 1   MKLEMICTGEEVLAGQIVDTNAAWFANLMMENGIEVQRRVTVGDRLEDLVAVFQERSLHA 60

Query: 65  DVVIVNGGLGPTSDDITAQAAAQAAEQPLVLNADWLSQLEAFFIGRGRAMPESNRKQAML 124
           DV++VNGGLGPTSDD++A+A A+A  + LV NA+W  +L  +F   GR MP+SN KQA L
Sbjct: 61  DVILVNGGLGPTSDDMSAEAMAKAKGESLVENAEWAERLHDWFTRHGREMPKSNIKQAWL 120

Query: 125 PANAEVIDNPIGTACGFKMQINDCWFYFTPGVPKEFYKMVSEQILPNLQRQFPSVQGQQC 184
           P +A ++DNP+GTACGF++++N  W +FTPGVP EF +MV EQ LP ++  F +      
Sbjct: 121 PESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFEFKQMVEEQFLPFVKATFDAGSQVAL 180

Query: 185 SRLYTFGTSESSISDKLDKMHLPEGYTLGYRSYLPFIEVKLFGPDQDQERRL-SLLKIIH 243
            +L T G  ESS++D+L+ M LP G TLGYRS++P+IE+K+F    +  + L ++   I 
Sbjct: 181 RKLLTLGRGESSLADELEAMALPAGITLGYRSFMPYIEIKVFARGVEAIKALGAVTDEIA 240

Query: 244 SHLEQYVVSIDEPMLTYLGHV-MAEKGLSLALAEQATQGGLSSWLLSDPNVEALAGHSWI 302
           + L   VV+ +   L    H  +   G+SL++AE  T G ++S L+  P   +   H  +
Sbjct: 241 ARLGNVVVAHNRTSLEEEIHARLNNSGISLSVAESCTGGLITSQLVGFPGSSSYL-HQGL 299

Query: 303 LSHRVSSELAHQDPLAAAFALAGATKDKCGTQMALVTGALKEDH---------------- 346
           +++   S++             GA   +   +MA    A+ +                  
Sbjct: 300 VTYSNESKVRVLGVSPQTLDDYGAVSIQTVEEMAKGARAILDSDFALATSGIAGPDGGTE 359

Query: 347 ------VSVALSTPNGEWGQTVKFVRRFSAQEQKEWIATLAADMLLRYLTGRSMFVGYSA 400
                 V++AL+T  G + Q VK  RR S    ++  A +A DML R L G ++ V YS+
Sbjct: 360 EKPVGTVAIALATKGGVYSQMVKLPRR-SRDMVRKVSAAVAYDMLRRELNGEAVIVDYSS 418

Query: 401 VER 403
           + R
Sbjct: 419 ISR 421