Pairwise Alignments

Query, 415 a.a., competence/damage-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., competence-damage inducible protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  101 bits (252), Expect = 3e-26
 Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 14/333 (4%)

Query: 29  LAREFYQHGFSLAKRATVGDSLPALVEELMMLSFNSDVVIVNGGLGPTSDDITAQAAAQA 88
           + +E  + G  + +  ++ D    ++E +       ++V+V GGLGPT DDIT Q   + 
Sbjct: 1   MGQELNKIGIEVLRIVSIRDREEEIMEAVDNAMKRVNIVLVTGGLGPTKDDITKQTLCKY 60

Query: 89  AEQPLVLNADWLSQLEAFFIGRGRAMPESNRKQAMLPANAEVIDNPIGTACGFKMQINDC 148
               L+ + +    ++    G+   M   N+ QAM+P +  VI+NP+G+A     + ++ 
Sbjct: 61  FHTELIFSEEVFENVKRVLAGK-IPMNALNKSQAMVPKDCTVINNPVGSASVSWFEKDNK 119

Query: 149 WFYFTPGVPKEFYKMVSEQILPNLQRQFPSVQGQQCSRLYTFGTSESSISDKLD--KMHL 206
                PGVP+E   +++E +LP L+ +F +      + L      ES +++KL+  +  L
Sbjct: 120 VLVSMPGVPQEMTAVMTESVLPKLREKFQTDVIMHRTFLVQH-YPESILAEKLEPWETAL 178

Query: 207 PEGYTLGYRSYLPFIEVKLFGPDQDQERRLSLLKIIHSHLEQYV-----VSIDEPMLTYL 261
           PE   L Y   L  I ++L G  Q++    S L    + LE  +        D P+   +
Sbjct: 179 PESIKLAYLPKLGIIRLRLTGRGQNKIEVESALNDEQAKLEAILGDDIFSEEDIPLEVIV 238

Query: 262 GHVMAEKGLSLALAEQATQGGLSSWLLS-DPNVEALAGHSWILSHRVSSELAHQDPLAAA 320
           G ++ +K L+++ AE  T G +++ L S   + E   G     S+ V   L H  P    
Sbjct: 239 GELLKKKNLTVSTAESCTGGSIAARLTSIAGSSEYFNGGIVAYSNEVKMNLLHVSP--ET 296

Query: 321 FALAGATKDKCGTQMALVTGALKEDHVSVALST 353
             + GA  ++  T + +V GA+K      A++T
Sbjct: 297 LEVYGAVSEQ--TVIEMVKGAMKALKTDCAVAT 327