Pairwise Alignments

Query, 415 a.a., competence/damage-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., competence/damage-inducible protein CinA (RefSeq) from Shewanella sp. ANA-3

 Score =  262 bits (670), Expect = 1e-74
 Identities = 158/426 (37%), Positives = 237/426 (55%), Gaps = 30/426 (7%)

Query: 4   MLKIAMLSTGEEVLHGDIVDSNAAWLAREFYQHGFSLAKRATVGDSLPALVEELMMLSFN 63
           M+K+ M+ TGEEVL G IVD+NAAW A    +HG  + +R TVGD L  L+      S +
Sbjct: 1   MMKLEMICTGEEVLSGQIVDTNAAWFASTMMEHGIEIQRRVTVGDRLEDLIAVFQERSLH 60

Query: 64  SDVVIVNGGLGPTSDDITAQAAAQAAEQPLVLNADWLSQLEAFFIGRGRAMPESNRKQAM 123
           +DV++VNGGLGPTSDD++A+A A+A  + LV N +W   LE +F    R MP SN KQAM
Sbjct: 61  ADVILVNGGLGPTSDDMSAEAMAKAKGESLVENREWRQHLEDWFTRNNREMPVSNLKQAM 120

Query: 124 LPANAEVIDNPIGTACGFKMQINDCWFYFTPGVPKEFYKMVSEQILPNLQRQFPSVQGQQ 183
           LP +A ++DNP+GTACGF++++N  W +FTPGVP E   MV EQ +P ++ +F       
Sbjct: 121 LPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMVKEQFIPFIREEFDLDAKVA 180

Query: 184 CSRLYTFGTSESSISDKLDKMHLPEGYTLGYRSYLPFIEVKLFGPDQDQERRLSLLKIIH 243
             +L T G  ESS++DK++ + LPEG T+GYRS +P IE+K+F      E+ ++LL  + 
Sbjct: 181 LKKLLTIGHGESSLADKIEPLELPEGITIGYRSSMPHIEIKIFARG---EKAIALLPRVT 237

Query: 244 SHLEQY----VVSIDEPMLTYLGHV-MAEKGLSLALAEQATQGGLSSWLLSDPNVEALAG 298
            H++      VV+ D+  L    H  +   GL+L++AE  T G ++S L+  P   +   
Sbjct: 238 GHIKMVLGTAVVAEDKATLAEEIHTKLLNSGLTLSVAESCTGGMITSQLVDFPGSSSYLQ 297

Query: 299 HSWI-LSHRVSSELAHQDP----------LAAAFALAGATKDKCGTQMALVT-------G 340
           H  +  S+     +   +P          +     +A   +    +  AL T       G
Sbjct: 298 HGLVTYSNESKVRVLGVNPATLDDHGAVSIPTVEEMAKGARAILDSDFALATSGIAGPDG 357

Query: 341 ALKE---DHVSVALSTPNGEWGQTVKFVRRFSAQEQKEWIATLAADMLLRYLTGRSMFVG 397
             +E     V++AL+T +G + Q +K  RR S    +   A +A DML R L   ++ V 
Sbjct: 358 GTEEKPVGTVAIALATRSGVYSQMIKLPRR-SRDLVRSLSAAVAYDMLRRELLTEAVIVD 416

Query: 398 YSAVER 403
           Y ++ R
Sbjct: 417 YQSIGR 422