Pairwise Alignments

Query, 170 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.5 bits (171), Expect = 1e-17
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 1   MNSTFIVNFVGKATPATIKQLAAVTHENGGKWLISKVNFIEDSVAAVIKIELPADNASTV 60
           M   FI   VG   P  ++ LA V+ E G +WL SK+   +   AA++K+ +  D  + +
Sbjct: 1   MKIQFIATVVGPLGPDVLQSLAKVSREQGAEWLSSKLIMQDGQFAAMMKVSIDDDKEAAL 60

Query: 61  K----QAFQTYPSLLVEITDADPHVHKSDAVYKVRLDANDRAGIVNEITHLLDGQGISIL 116
           +    + F T   +   +   +  V +     +V LD NDR G+  ++ ++L   G+S+ 
Sbjct: 61  RDNLAREFPTLGFVYAPVAAVEGPVQQ----IQVELDCNDRPGLTRDVNNVLANLGVSVS 116

Query: 117 DMDCQRVFIAGGGGISSSLFTANVAMRLPVNIEIDDVINELEALSEDTRV 166
             +  RV +     +  +LF A++++ L   ++I  + + LEA+  + RV
Sbjct: 117 HFESHRVQVT---SLGRTLFNASLSVALAPEMDIATLTSALEAVEPNARV 163