Pairwise Alignments

Query, 170 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., amino acid-binding ACT domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 15  PATIKQLAAVTHENGGKWLISKVNFIEDSVAAVIKIELPADNASTVKQAFQTYPSLLVEI 74
           P  ++Q+A     +GG WL S++  I+   AA++ +E+PA N  T+ +  +    L +  
Sbjct: 14  PGLVEQIAHSVSRHGGNWLDSELRHIDGIFAAILLLEVPAANWDTLLENLECIEGLTLTY 73

Query: 75  TDADPHVHKSDAVYKVR---LDANDRAGIVNEITHLLDGQGISI 115
                   K+ A   +R   L A DR G+V++I++ ++  G +I
Sbjct: 74  A----KTRKTQAPQTIRRYSLVAYDRPGLVHDISNKINELGANI 113



 Score = 26.2 bits (56), Expect = 3e-04
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 10/73 (13%)

Query: 88  YKVRLDANDRAGIVNEITHLLDGQGISILDMDCQRVFIAGGGGISSSLFTANVAMRLPVN 147
           Y V L   D+ G+V +I H +   G + LD + + +           +F A + + +P  
Sbjct: 4   YLVTLQVADKPGLVEQIAHSVSRHGGNWLDSELRHI---------DGIFAAILLLEVPA- 53

Query: 148 IEIDDVINELEAL 160
              D ++  LE +
Sbjct: 54  ANWDTLLENLECI 66