Pairwise Alignments

Query, 170 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., ACT domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.1 bits (113), Expect = 7e-11
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 18  IKQLAAVTHENGGKWLISKVNFIEDSVAAVIKIELPADNASTVKQAFQTYPSLLVEITDA 77
           ++Q+A     +GG WL S++  I+   AA++ +E+P+     + +A +    L +     
Sbjct: 17  VEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPSMRIDELIEALECIDGLTL----- 71

Query: 78  DPHVHKSDAVYKVR-----LDANDRAGIVNEITHLLDGQGISILDMDCQRVFIAGGGGIS 132
             +   S A+  +R     L + DR G+V +I++ +   GI+I     Q    AG  GI 
Sbjct: 72  -TYAKTSVALKPIRRLSYSLVSYDRPGLVLDISNRITALGINIEQFSSQ-FETAGHTGI- 128

Query: 133 SSLFTANVAMRLPVNIEIDDVINELEALSED 163
            +LF A + + L    + + ++  L AL +D
Sbjct: 129 -ALFRATIGLGLTELAQEEQLVQSLYALGDD 158



 Score = 34.3 bits (77), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 10/73 (13%)

Query: 88  YKVRLDANDRAGIVNEITHLLDGQGISILDMDCQRVFIAGGGGISSSLFTANVAMRLPVN 147
           Y + L A DR G+V +I H +   G + LD + + +           +F A + + +P +
Sbjct: 4   YLITLQAPDRKGLVEQIAHAVSRHGGNWLDSELRHI---------DGIFAAILLLEVP-S 53

Query: 148 IEIDDVINELEAL 160
           + ID++I  LE +
Sbjct: 54  MRIDELIEALECI 66