Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  283 bits (723), Expect = 2e-80
 Identities = 178/545 (32%), Positives = 293/545 (53%), Gaps = 10/545 (1%)

Query: 1   MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAY 60
           M  L ++ +S +L  I++V IV   +L  +    +  +L   +  + + V+Q+    + Y
Sbjct: 1   MNSLRSVSISRRLWLILVVSIVMLFTLGALMLKQIHSDLYQAKVQKTQHVVQTASGVLTY 60

Query: 61  LNQ-----TLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNP 115
                   TL ++ AQ+QA + +  LR++  +Y ++ D +   ++HP    L GQ + + 
Sbjct: 61  YQGLEAAGTLTRDAAQKQALSAVRGLRYNQTDYFWINDLTPVMIMHPTNPKLEGQNL-SA 119

Query: 116 GKDTEGQFWFT-MIDLARNGQQGSLIYPWKNQQGN-PADKLSFVNGFAPWGWILGSGMLL 173
            +D  G   F  M+ +A++   G + Y W       P  K S+V  F PWGWI+GSG+ +
Sbjct: 120 IRDPNGYALFNEMVAIAKSKGAGMINYLWPKPGAEAPVGKTSYVQLFEPWGWIIGSGVYV 179

Query: 174 DDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQ 231
           DD++     Q ++     L++TL+M  L  +I R+++ PL    + M  +A G  DLT  
Sbjct: 180 DDVQAEFQSQVIKASVVGLVITLLMGLLLTLIVRSIVGPLQETVNAMANIASGESDLTRT 239

Query: 232 IPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRD 291
           +   G+DE+  +A+  N   A +   + +   SAS++ +++  + + A +  +    Q  
Sbjct: 240 LDTHGQDEVTQLARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQ 299

Query: 292 QLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGV 351
           Q+  +ATA+N++T  V DVA +AE  A +  DA  +A  G  ++  S+  I  LS  +  
Sbjct: 300 QMELVATAINEVTYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQ 359

Query: 352 ATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNL 411
           A + +  L     QI  V  VI  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L
Sbjct: 360 AVEVIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLL 419

Query: 412 ASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHV 471
           A RT  ST EIQ MI RLQ  + +    +  S   +  ++  A  AG+ L+ I   ++++
Sbjct: 420 AQRTQKSTAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNL 479

Query: 472 SDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKL 531
           +     IA+A  +Q+ V E++N+NV+     +   + AA   ++ S +L  LS QL+  L
Sbjct: 480 NSLNASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLL 539

Query: 532 TAFKL 536
           T F++
Sbjct: 540 TQFRV 544