Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 4e-61
 Identities = 130/349 (37%), Positives = 207/349 (59%), Gaps = 8/349 (2%)

Query: 192 LIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINNSI 251
           +   L  + L ++++R++++PL    +  + VA+GDLT  I   G DE+     R+  ++
Sbjct: 197 VFAALATVALAMLLTRSIVKPLGEALNAAENVARGDLTRPIETHGNDEVS----RLLKAL 252

Query: 252 AAVHDALVESVQ----SASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATV 307
           AA+   L E++Q    SA+ +A AA  + +   +++Q++  Q +++ Q ATA+ +MT  V
Sbjct: 253 AAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAV 312

Query: 308 ADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQIS 367
            +VA +A  T+  T  +S+ A+LG + V  +VD+I AL+ ++ V    V  L      I 
Sbjct: 313 EEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTGGLVQSLANQSQDIG 372

Query: 368 EVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMIN 427
           +V  VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  ST EI+ M+ 
Sbjct: 373 KVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQEIEQMVQ 432

Query: 428 RLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSA 487
            ++  A     +MQ S + AA+++A AE AG  L  I   +  + ++   IA+AAEEQ+ 
Sbjct: 433 GMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHERNLVIASAAEEQAQ 492

Query: 488 VAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           VA E++RN+  I D ++  +  A   +  S +L+ L+  L   +  F++
Sbjct: 493 VAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQRFQV 541