Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  235 bits (599), Expect = 4e-66
 Identities = 170/560 (30%), Positives = 281/560 (50%), Gaps = 28/560 (5%)

Query: 2   LKLENIKVSYKLAAIVIVGIVGFLSLLFI-------SANALKENLVAEREARLKAVIQST 54
           L L+   +S  +  +++  ++  L+  FI            +E L++E +A L+  +   
Sbjct: 3   LSLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKATLQNYVAVG 62

Query: 55  LSQVA--YLNQTLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQM 112
           L+ +   Y   T    +A+ QA  L++ + +  + Y F  D     +      D VG+  
Sbjct: 63  LTAIKPLYDAATPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSF 122

Query: 113 GNPGKDTEGQFWFTMIDLARNGQQGSLIYPWKNQQGNPAD---KLSFVNGFAPWGWILGS 169
            +  +D  G +     DL +  + G+    + +      D   KL +    + W   +GS
Sbjct: 123 KD-NRDPNGVY--VNRDLVKVAKDGTHYLEYSSPLPGSQDLVPKLGYTEYLSKWDLAVGS 179

Query: 170 GMLLDDIE-----------HAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKD 218
            + LD IE             V    L +     +V LV+  +G++++ A+++PL  +KD
Sbjct: 180 SVNLDGIEAQVALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKD 239

Query: 219 VMKKVA--QGDLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIA 276
            +  +A  +GDLT ++ +  +DELG +A   N  +  +H  + +     S +     +++
Sbjct: 240 NLDDIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVS 299

Query: 277 SSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVH 336
             A+ + QA+  QR +  Q+ATA+N+M++   +VA  A+  A       +E     + V 
Sbjct: 300 EQAQRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVA 359

Query: 337 SSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGD 396
            S+  I AL  ++  +   ++ L++ V  I  V  VI  I+EQTNLLALNAAIEAARAG+
Sbjct: 360 GSIQQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGE 419

Query: 397 QGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAEN 456
            GRGFAVVADEVR LASRT  ST EIQ MI+RLQ    +   AM++S      +   A  
Sbjct: 420 AGRGFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANE 479

Query: 457 AGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEE 516
           AG+ L  +   I  ++    QIA+AAEEQ+AVAEE+NR+V  I  A   ++      A+ 
Sbjct: 480 AGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQT 539

Query: 517 SEKLADLSRQLDQKLTAFKL 536
           S  LADL ++L + +  F++
Sbjct: 540 SRSLADLGQRLGKLVGQFRI 559