Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (562), Expect = 8e-62
 Identities = 150/471 (31%), Positives = 247/471 (52%), Gaps = 24/471 (5%)

Query: 72  EQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLA 131
           EQ   +INA+  +G  Y F++ +    +VHP     V + +     +        + ++ 
Sbjct: 177 EQLAKIINAVDLNGIGYAFLVSDDGKILVHP-DNTRVTKTLAQAFPEGPPSINSALNEVQ 235

Query: 132 RNGQQGSLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGF-A 190
            NG+   + +             + +NG     W +G  +  D   +AV   F      A
Sbjct: 236 ENGRTRIVTF-------------TPINGLPSLHWSIGLSVDKDKA-YAVLHAFRASALVA 281

Query: 191 TLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVA--QGDLTAQIPVLGKDELGIVAQRIN 248
           TLI  LV +GL  ++  A+++PL ++   M+ +A  +GDLT ++  L +DE G++A   N
Sbjct: 282 TLIAMLVTVGLLGLLINALMRPLRSMGSAMQSIADGEGDLTQRLHSLSRDEFGMMAGGFN 341

Query: 249 NSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVA 308
             +  +  ++ E + S+  + + A +++ ++  + ++  +Q      +ATA+N++ A   
Sbjct: 342 RFVERIQQSIREVLASSVQLTQLAAQVSQASNASLKSSDTQAALTHNVATAINELGAAAQ 401

Query: 309 DVA---GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQ 365
           ++A    HA   A DT D ++E   G   V  S+ ++  LS ++      +  L E  ++
Sbjct: 402 EIARSAAHASSRASDTRDQTQE---GQSVVQRSISAMSQLSSQVVNTRQDIESLNEKTLK 458

Query: 366 ISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTM 425
           I  +  VI GIS+QTNLLALNAAIEAARAGD GRGFAVV+DEVR LA RT  S  EI +M
Sbjct: 459 IGRILDVIKGISDQTNLLALNAAIEAARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSM 518

Query: 426 INRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQ 485
           I  LQ  A S  SAM +SQ  + ++V TA  AG  L+ ++  I  + +    +ATA EEQ
Sbjct: 519 IEELQAGAGSAVSAMLESQRHSDDNVTTARLAGERLNRVLMGIGEIDEINLSVATATEEQ 578

Query: 486 SAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           ++V + ++R++S IND   EM        +   +L + SR+L Q +  FK+
Sbjct: 579 TSVVDNLDRDISHINDLNQEMVGNLQSTLQACTELENQSRRLQQMVNTFKI 629