Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  224 bits (571), Expect = 6e-63
 Identities = 171/548 (31%), Positives = 283/548 (51%), Gaps = 49/548 (8%)

Query: 4   LENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQ 63
           + NI+VS KL+  +  G+V  L+LL  S        + +R  +++ +     +Q++   +
Sbjct: 5   ISNIRVSAKLS--LGFGLVLGLALLLASTGWYAVATLTDRGVKIEKI-----AQISDYTK 57

Query: 64  TLPKEQAQEQAKALINA---LRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTE 120
            L   + +  A    NA   L+   +N    +   R     PI Q+L+ QQ  N      
Sbjct: 58  DLRISRLRLGANPQPNAYQPLQKILDNLAAHLQSIRDHFTSPIDQELIQQQ--NTSVREY 115

Query: 121 GQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAV 180
           GQ    ++DLA+       IY    Q G+                     +LLD  +  +
Sbjct: 116 GQL---LLDLAKPNADQVSIYKRMGQLGD---------------------LLLDTTQKLI 151

Query: 181 YQQFLR-----------MGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLT 229
             Q  +           +G    +  L+      +I++ ++ PL      + ++A+GDL+
Sbjct: 152 DSQNAKRDADAASAKVLLGLVAAMTLLLGALAAWIITQQIVNPLQYTLQAVNRIARGDLS 211

Query: 230 AQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSAS-SVAEAAIRIASSAEETSQAVVS 288
             + V  +DELG +   +   +  +H+ L+E ++S    VA AA ++++  E+T+  V +
Sbjct: 212 EPVQVNRRDELGQLQSGLQQMMLNLHE-LIEGIRSGVIQVASAAEQLSAVTEQTNAGVNN 270

Query: 289 QRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVE 348
           Q+ +   +ATAM++MTATV +VA  AE+ +     A ++A+ G++ V+ ++  I+ L+ E
Sbjct: 271 QKTETDHVATAMSEMTATVQNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEE 330

Query: 349 LGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEV 408
           L  + D V  L+E   +I  V  VI  +++QTNLLALNAAIEAARAG+ GRGFAVVADEV
Sbjct: 331 LNQSADAVRHLQEQSEKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEV 390

Query: 409 RNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHI 468
           R+LA RT  ST+EI++++  +Q    + AS M+ SQ L  +SV     A   L  I + +
Sbjct: 391 RSLALRTQRSTEEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKV 450

Query: 469 QHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLD 528
             +     QIATAAE+QSAVAEE+NR+V  + D + + +      A  S +LA L  +L+
Sbjct: 451 SIIQAMNQQIATAAEQQSAVAEEINRSVINVRDISEQTASTCEETASSSTELARLGHELE 510

Query: 529 QKLTAFKL 536
           + +  FK+
Sbjct: 511 RLVGRFKV 518