Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  224 bits (570), Expect = 1e-62
 Identities = 142/353 (40%), Positives = 204/353 (57%), Gaps = 4/353 (1%)

Query: 188 GFATLIVTLVMIGLGVV--ISRAVIQPLDTIKDVMKKVAQG--DLTAQIPVLGKDELGIV 243
           G A + + +  IGL V+  +   + +PL  +  ++  +AQG  DLT ++     DELG +
Sbjct: 361 GMAMVGLLIASIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLTSDRADELGSI 420

Query: 244 AQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQM 303
           A+  N  +A +   + + V S  SV++++   A  A  T+  V  Q  ++ Q+ATA+++M
Sbjct: 421 AKGFNTFLAKLQAMITQVVTSVQSVSDSSEHTADIAIRTNIGVHKQMAEIDQVATAVHEM 480

Query: 304 TATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGV 363
           TAT  DVA +A   A+    A + A  G + V  + +SI  L+VE+G A   V  L +  
Sbjct: 481 TATAQDVARNATQAAQAASHADQAAAQGMQIVRDTSNSIGVLAVEIGKAVGVVQTLAKDS 540

Query: 364 MQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQ 423
             I+ + + I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVRNLA +T  +T+EIQ
Sbjct: 541 ENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQ 600

Query: 424 TMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAE 483
           TMI  LQQ        M+ SQ     SV  A  A   L  I   +  ++D  TQIA+AAE
Sbjct: 601 TMIQHLQQGTRDVVRVMEDSQNRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAE 660

Query: 484 EQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           EQSAVA+++NRNV  I   A E++  A   +  S  L  L+ Q  + +  FK+
Sbjct: 661 EQSAVADDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 713