Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  224 bits (572), Expect = 6e-63
 Identities = 147/376 (39%), Positives = 216/376 (57%), Gaps = 15/376 (3%)

Query: 170 GMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVI---------SRAVIQPLDTIKDVM 220
           G L  ++   + Q+ L M   TL+++ V I L +V          +RA ++ L  I D  
Sbjct: 307 GFLEVELAERLEQKRLLM---TLLISAVAIVLVLVAYLYAGFYASTRASLRSLGKIMD-- 361

Query: 221 KKVAQGDLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAE 280
            KVA GD+TA+  V  +DELG + Q  N ++A V + +    Q+ + V   A R+ S + 
Sbjct: 362 -KVAAGDMTARYQVQSRDELGELGQVFNTTVAQVRELIERVGQTVAEVDRQAQRVESVSG 420

Query: 281 ETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVD 340
           E++Q V  QR Q+ Q+ATAMN+M+AT  +VA  AE         ++E   G   V + V 
Sbjct: 421 ESNQTVSEQRGQIEQVATAMNEMSATAQEVASSAEAAVGSAQSVNEETVSGRALVVAQVG 480

Query: 341 SIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRG 400
            I+ L+ E+  +   +N+L      IS+V  VI  I+EQTNLLALNAAIEAARAG+QGRG
Sbjct: 481 GIQRLASEIEQSVQVINQLAGDSKAISQVLDVIKTIAEQTNLLALNAAIEAARAGEQGRG 540

Query: 401 FAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSD 460
           FAVVADEVR LA RT  ST EI+ MI RLQ    +    M  S ALA ++V  +      
Sbjct: 541 FAVVADEVRGLAQRTQKSTAEIEQMIARLQNGVGAAVKTMHASHALAEDTVGQSGQVEQA 600

Query: 461 LSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKL 520
           L  I+  +  + D+  QIA AAE+Q+AVA +++RN+  IN+A    ++ A +  + S +L
Sbjct: 601 LENILGAVGLIVDQNQQIAAAAEQQTAVAHDIDRNIVAINEAGQRTAEGAGHTEQASREL 660

Query: 521 ADLSRQLDQKLTAFKL 536
           + L  +L Q ++AF++
Sbjct: 661 SQLVGRLQQLISAFRV 676