Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  206 bits (523), Expect = 3e-57
 Identities = 143/468 (30%), Positives = 237/468 (50%), Gaps = 28/468 (5%)

Query: 77  LINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGN--PGKDTEGQFWFTMIDLARNG 134
           +INAL F+G  + F++      +VHP    ++ + +G   PG        ++  +L  +G
Sbjct: 182 IINALDFNGMGHAFLVSGDGKILVHPDGSKVM-KSLGELFPGHTPSLDANYSEAEL--DG 238

Query: 135 QQGSLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIV 194
           Q   L +             S V G     W +  G+ LD  +   Y        + ++ 
Sbjct: 239 QTRILSF-------------SRVQGLPSVSWYV--GISLDKAK--AYAALASFRTSAVVA 281

Query: 195 TLVMIGLGV----VISRAVIQPLDTIKDVMKKVA--QGDLTAQIPVLGKDELGIVAQRIN 248
            L  +G+ +    ++ R +++PL  +   M  +A  +GDLT ++ V  KDE G +A   N
Sbjct: 282 ALTAVGVILLLLGMLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFN 341

Query: 249 NSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVA 308
             +  +H ++ E   +   V E A R+ +++  +      Q  + + +A A+N++ A   
Sbjct: 342 RFVERIHTSIREVSSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQ 401

Query: 309 DVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISE 368
           ++A +A D ++    A  +A  G + V  ++ ++R LS ++  +  Q+  L    + I +
Sbjct: 402 EIARNAADASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQ 461

Query: 369 VTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINR 428
           +  VI GISEQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA RT  S  EIQ MI +
Sbjct: 462 ILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQ 521

Query: 429 LQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAV 488
           LQ  A ++   M +SQ  + +SV+ A+ AG  L  +   I  +      +ATA EEQ+AV
Sbjct: 522 LQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAV 581

Query: 489 AEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
            E +N +++ IN    +  +           L   +R+L Q + +F++
Sbjct: 582 IESLNMDITEINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFRI 629