Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  213 bits (543), Expect = 1e-59
 Identities = 134/351 (38%), Positives = 208/351 (59%), Gaps = 8/351 (2%)

Query: 190 ATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINN 249
           A ++  +  I L ++++R+++QPL     V + +A GDLT    V+G DE      R+ +
Sbjct: 193 AMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGGDLTRHFQVVGSDE----PARLLS 248

Query: 250 SIAAVHDALVESVQ----SASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTA 305
           ++ A+  +L E++Q    S++ +A AA  +    E++++ +  Q  ++ Q ATA+N+MTA
Sbjct: 249 ALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQAATAVNEMTA 308

Query: 306 TVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQ 365
            V +VA +A  T+  + ++ + A  G + V  +VDSI  L+ ++     +V +L   V  
Sbjct: 309 AVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVERLAGQVRD 368

Query: 366 ISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTM 425
           IS+V  VI  I+EQTNLLALNAAIEAARAGD GRGFAVVADEVR LA RT  ST EI+ M
Sbjct: 369 ISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQM 428

Query: 426 INRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQ 485
           I  + Q       AMQ S   A  ++  A  AG  L  I + I  +S++   IA+A+EEQ
Sbjct: 429 IGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVIASASEEQ 488

Query: 486 SAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           + VA E++RN+  I D +L+ S  A   +  S++LA L+  L+  +  F++
Sbjct: 489 AQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARFQV 539