Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  230 bits (586), Expect = 1e-64
 Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 6/349 (1%)

Query: 194 VTLVMIGLGVVIS-----RAVIQPLDTIKDVMKKVAQG-DLTAQIPVLGKDELGIVAQRI 247
           + L+++ +GVV+        +I+ ++ ++  M  +A+  DL+  + +  KDE+G +    
Sbjct: 191 IQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEIGAMGDAF 250

Query: 248 NNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATV 307
           N  I     +L         + + + R++  AE+T  AV  QR +   +A+AMN+M+ATV
Sbjct: 251 NRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATV 310

Query: 308 ADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQIS 367
            +VA +A  TA  +  A  E+  G K    ++D I  L  E+  A   + +++     I 
Sbjct: 311 QEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASID 370

Query: 368 EVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMIN 427
            V  VI+GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LASRT  ST+EIQ MI 
Sbjct: 371 MVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIE 430

Query: 428 RLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSA 487
           +LQ    +   AM+++Q  A +     E A   L LI   +  +++  TQIATAAE+QSA
Sbjct: 431 QLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSA 490

Query: 488 VAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           VAEE+NRN+S I+  A   S  AT  +E S++L  L+ +L++ +  FKL
Sbjct: 491 VAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539