Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  246 bits (629), Expect = 1e-69
 Identities = 179/546 (32%), Positives = 283/546 (51%), Gaps = 27/546 (4%)

Query: 13  LAAIVIVGIVGF--LSLLFISANALKENLVAEREARLKAVIQSTLSQVA--YLNQTLPKE 68
           L AI++ GI  +   SL        +++L+ +R A LK  ++   + +   Y        
Sbjct: 44  LLAILLSGIAVYELQSLAEQQEAHTRDSLIQDRRAELKHYVELARNAIGPIYERSAEGDM 103

Query: 69  QAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMI 128
           QA++QA A++  L +  + Y +  D     ++    +D +GQ   +  +D  G +   + 
Sbjct: 104 QARDQAVAILERLSYGKDGYFWGYDTQAVRILQGNTKDKIGQSFYDY-RDPNGVY--AIR 160

Query: 129 DLARNGQQGSLIYPWKNQQGNPAD---KLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFL 185
           +L R GQ GS    +    GN ++   K+ +      W  + G+ + LD +E  V  Q  
Sbjct: 161 ELVRAGQDGSRYVDYSFVLGNSSELVPKVGYAEFLPKWKMVFGTSLNLDGVERDV--QAA 218

Query: 186 RMGFATLI---VTLVMIG----------LGVVISRAVIQPLDTIKDVMKKVAQGD--LTA 230
           R  F   I   VT++++           L + +S A++ PL  IK  +  +AQGD  LT 
Sbjct: 219 RAEFQKRIDGLVTIMLVSAFALLVLMALLAIFMSNALLSPLLLIKRNLDDMAQGDGDLTQ 278

Query: 231 QIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQR 290
           ++P+  +DELG +A   N  +  +H  + +   + + ++     +AS A+ + QA+  QR
Sbjct: 279 RLPITSQDELGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQR 338

Query: 291 DQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELG 350
            +  Q+ATA+N+M+A   +VA  A+  A    +  ++     + V  S+  I  L  EL 
Sbjct: 339 SETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELR 398

Query: 351 VATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRN 410
            + + +  L++ V  I  V  VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR 
Sbjct: 399 GSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRA 458

Query: 411 LASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQH 470
           LASRT  ST EIQ MI+RLQ    +T S M ++     ++   A  AG  L  I   I  
Sbjct: 459 LASRTQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGT 518

Query: 471 VSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQK 530
           ++    QIA AAEEQ+AVAEE+NR+V  I DA   ++  A   A+ S +L  L+ +L + 
Sbjct: 519 INSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQKL 578

Query: 531 LTAFKL 536
           +  F++
Sbjct: 579 VGQFRI 584