Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  244 bits (622), Expect = 8e-69
 Identities = 182/546 (33%), Positives = 280/546 (51%), Gaps = 27/546 (4%)

Query: 13  LAAIVIVGI--VGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVA--YLNQTLPKE 68
           L A+V+ G+  V    L        + +L+ +R A LK  ++   + +   Y        
Sbjct: 21  LLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELAKNAIGPIYERSAEGDM 80

Query: 69  QAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMI 128
           QA+ QA A+   L +    Y +  D     V     ++ +G+   +  +D  G F   + 
Sbjct: 81  QARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESFADY-RDPNGVF--AIR 137

Query: 129 DLARNGQQGS--LIYPWKNQQGNP-ADKLSFVNGFAPWGWILGSGMLLDDIEH------A 179
           +L + GQ  S  + Y +     N    K+ +      W  + G+ + LDD+E       A
Sbjct: 138 ELVKAGQDSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLNLDDVERDVVEARA 197

Query: 180 VYQQ------FLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGD--LTAQ 231
           V+Q        + +G A L++ L M GL V++S A+++PL  IK  +  +AQGD  LT +
Sbjct: 198 VFQARIDSLTLIMLGSALLLLIL-MAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHR 256

Query: 232 IPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAI-RIASSAEETSQAVVSQR 290
           +P+  +DELG ++   N  +  +H ALV  V   ++     +  +AS A+ + QA+  QR
Sbjct: 257 LPITSRDELGELSTSFNRFVEKIH-ALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQR 315

Query: 291 DQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELG 350
            +  Q+ATA+N+M+A   +VA  A+  A    +  ++     + V  S+  I  L  EL 
Sbjct: 316 SETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELR 375

Query: 351 VATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRN 410
            + + +  L++ V  I  V  VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR 
Sbjct: 376 GSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRA 435

Query: 411 LASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQH 470
           LASRT  ST EIQ MI+RLQ     T   M ++     ++   A  AG  L  I   I  
Sbjct: 436 LASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGT 495

Query: 471 VSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQK 530
           ++    QIA AAEEQ+AVAEE+NR+V  I DA   ++  A   A+ + +L  L+ QL + 
Sbjct: 496 INSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRL 555

Query: 531 LTAFKL 536
           +  F++
Sbjct: 556 VGQFRI 561