Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (577), Expect = 2e-63
 Identities = 132/360 (36%), Positives = 214/360 (59%), Gaps = 1/360 (0%)

Query: 177 EHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLG 236
           E   + + L++G   L++ L ++   V+I+R + +PL     +++++A GDLT    V  
Sbjct: 282 EDTAHARSLQIGCVVLVMLLGILA-AVIITRQITRPLRDTLAIVERIASGDLTHTEAVTR 340

Query: 237 KDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQL 296
           +DELG++ Q I      + + +       + +A AA  +++  E+TS  V SQ+ +  Q+
Sbjct: 341 RDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQV 400

Query: 297 ATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQV 356
           ATAM++M+ATV +VA +AE  +    DA ++A  GDK V  ++  I  L+ E+  ++D +
Sbjct: 401 ATAMHEMSATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQQIERLAAEVVRSSDAM 460

Query: 357 NKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTH 416
           N L++   +I +V  VI  ++EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT 
Sbjct: 461 NVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQ 520

Query: 417 HSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKAT 476
            ST+EI+ ++  LQ      +  M  S+ L  +SV     AG+ L  I   +  +     
Sbjct: 521 QSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTSLESITRTVSSIQAMNQ 580

Query: 477 QIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           QIA AAE+QS+VA+E++R++  + D + + ++A+   A  S +LA L  QL   ++ F++
Sbjct: 581 QIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFRV 640