Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  218 bits (556), Expect = 3e-61
 Identities = 126/345 (36%), Positives = 203/345 (58%)

Query: 192 LIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINNSI 251
           + V L+ + L  ++++ +  P+ +   V +++A  DLT ++ V G DE G +   +    
Sbjct: 195 IFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVSGTDEAGRLLSALATMQ 254

Query: 252 AAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVA 311
             +   +++   S+S +A A+  + +  E++S  +VSQ D+++Q ATA+ +M+A V +VA
Sbjct: 255 QNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQAATAVTEMSAAVDEVA 314

Query: 312 GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTS 371
            +AE  + ++        +G + V  ++ SI  LS  +   ++Q+  L      IS+V  
Sbjct: 315 RNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQITGLSNRAQNISKVVE 374

Query: 372 VISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQ 431
           VI  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST EI+ MI  +Q 
Sbjct: 375 VIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQVSTQEIEQMIQAIQN 434

Query: 432 LAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEE 491
            +     AM  S+ LAA S++ A +A S L  I   I  ++++   IATA+EEQ+ VA E
Sbjct: 435 DSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERNILIATASEEQAHVARE 494

Query: 492 MNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           ++RN+  I + A + S  A+  A    +++ L+  L+Q +  FK+
Sbjct: 495 VDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFKV 539