Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (576), Expect = 2e-63
 Identities = 133/345 (38%), Positives = 204/345 (59%)

Query: 190 ATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINN 249
           AT +  ++ I    VI+R +  PL    +V+++VA GDL+  + V  KDELG +   I  
Sbjct: 292 ATALAMVLGILAAWVITRQITTPLQETLEVVERVASGDLSRNLNVDRKDELGKLQATIQR 351

Query: 250 SIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVAD 309
              ++ + +       + +A AA  +++  E+TS  V SQ+ +  Q+ATAM++MTATV +
Sbjct: 352 MTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQE 411

Query: 310 VAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEV 369
           VA +AE+ +   + A ++A  G++ V+ ++  I  L+  +G +++ +  LK+   +I  V
Sbjct: 412 VARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSV 471

Query: 370 TSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRL 429
             VI  ++EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RT  ST+EI+ +I RL
Sbjct: 472 LDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARL 531

Query: 430 QQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVA 489
           Q       + M  S+ L+ +SV     AG  L+ I   +  +     QIA AAEEQSA A
Sbjct: 532 QSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATA 591

Query: 490 EEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAF 534
           EE+NR++  + D + + S A+   A  S +LA L   L   ++ F
Sbjct: 592 EEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSRF 636