Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  220 bits (560), Expect = 2e-61
 Identities = 165/520 (31%), Positives = 256/520 (49%), Gaps = 46/520 (8%)

Query: 20  GIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQTLPKEQAQEQA--KAL 77
           G+VG    L +    ++E   +  + + K  + ST   +   +    K +   +A  K+L
Sbjct: 228 GVVGVDLNLPVFQKMIEELSASLYQGQAKVTLLSTKGLIVAASHYDKKARPLGEAIDKSL 287

Query: 78  INALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLARNGQQG 137
            N +   G    +++++S   V +PI   L G Q            W   I++ R     
Sbjct: 288 ANQILGLGKGDGYLLNDSSMIVAYPINIPLSGSQ------------WLLAIEVPRQIALA 335

Query: 138 SLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLV 197
           S      + Q   A    FV                           L +G     V ++
Sbjct: 336 SAEQVEGSMQAMAASLGRFV---------------------------LLLGIGIAAVAVI 368

Query: 198 MIGLGVVISRAVIQPLDTIKDVMKKVA--QGDLTAQIPVLGKDELGIVAQRINNSIAAVH 255
           +I L +   R+V+ P+  I+  + ++A  +GDLT  + V    EL  +    N  I  +H
Sbjct: 369 LIALFI---RSVVAPIQQIQQRVSQLASAEGDLTQSLKVDEHAELIALGNGFNAFIGKLH 425

Query: 256 DALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAE 315
             + E  + A+     +   A  AEET Q+V  Q  ++  + TA+N+M+ T  +VA  +E
Sbjct: 426 GLISELKKVATESRNESQATARIAEETKQSVNRQYSEIESVVTAVNEMSHTAHEVAKASE 485

Query: 316 DTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISG 375
            TA ++   + +  +    +  +V  +  +S E   A   V K+ E    IS++  VIS 
Sbjct: 486 QTASESAAMASQVKVSQDSLTQAVSLVSTMSKESLQAKIAVGKVAESSTNISKILEVISA 545

Query: 376 ISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVS 435
           I+ QTNLLALNAAIEAARAG+QGRGFAVVADEVR+LAS+T  STD+I  +I+ L+Q    
Sbjct: 546 IAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQASTDDISRLIDALEQEVKG 605

Query: 436 TASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRN 495
            +  + K   LA  +VA  E A   LS++V  I  +S++ TQIATAAEEQSAV EE++RN
Sbjct: 606 ASGIIDKGVGLAEQAVAQTEQAFEALSVMVAGINEISNQVTQIATAAEEQSAVTEEVSRN 665

Query: 496 VSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFK 535
           ++GI+D+A E+   A    E SE LA L  + + +L   +
Sbjct: 666 ITGISDSAAELMDLAGKARESSESLAKLVGRQESQLAKLR 705